| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3328 |
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| Symbol | |
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| ID | 5663716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4072167 |
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| End bp | 4072925 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641237986 |
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| Product | TonB family protein |
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| Protein accession | YP_001503178 |
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| Protein GI | 157963144 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.379143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCTA AACGTTATTT TGCTTTTGGT TGTTTAACGA TTTTAATCCA AGGCGGCGTA
CTCGCCTCAC AAAACAGCCA GCCAGATCCG CGACTAAACT CTGGCTCTGC GATGGGCTCT
AGTCAGGCAG TCAGCATCTC TATTGCAATG CAAGCCAGCC AAGCTGTAAA AACGCCCGAG
CAGGTTCAAG CACCTGTTGA AACCCAAGCT AAGCCGACGA CTCAAGCTAA TCCTGTTGCT
CAGACCATTG CGAAACCCCA GCCAATTGCC AAGACTAACG CCATTGCCCA AACCCAAGCT
AAACCGCTCT CCCCCAAGAT GGCTGTAACT GACAAGCCAA AAACGCTAAA AGAGGTAGCG
AAAAAGTTGG ATCCAATCAA GCCAATCGAA AAAACACAAG AAAGTGCCGC TGAAGTACAA
ACAGAGCAAC TTTCTCACAA TCAACCAAAG GCTGATGCCA AGCAAGGTGT AAGCAAGCAA
GCCGTTGCAT TAAGCCAACC CACTTTTGCC ACACCACCGA GCCAACCCCA CTACCCAAAA
AAAGCACGTA AAAAGGGATT TCAAGGCACT GCGACCGTGG AGGTGATGTT TAACCAGCTT
GGCGAGCAAC TCTCGCTCAC CTTGGTGGAT AGCTCCGGTT ACCGATTATT AGACAAAGCC
GCGTTAAACG CTGTCGAGAA GTGGCAGTTT GCCGCACCTA GCCCACAAAC CGCCTACGCC
TACACTGTGC GAGTACCGGT GAAGTTTGCA TTGAATTAA
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| Protein sequence | MTPKRYFAFG CLTILIQGGV LASQNSQPDP RLNSGSAMGS SQAVSISIAM QASQAVKTPE
QVQAPVETQA KPTTQANPVA QTIAKPQPIA KTNAIAQTQA KPLSPKMAVT DKPKTLKEVA
KKLDPIKPIE KTQESAAEVQ TEQLSHNQPK ADAKQGVSKQ AVALSQPTFA TPPSQPHYPK
KARKKGFQGT ATVEVMFNQL GEQLSLTLVD SSGYRLLDKA ALNAVEKWQF AAPSPQTAYA
YTVRVPVKFA LN
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