| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3324 |
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| Symbol | |
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| ID | 5663712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4066318 |
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| End bp | 4068360 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641237982 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_001503174 |
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| Protein GI | 157963140 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.51627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCAAA ACGCTTCCTC TGTCGCCAAA GCCGAGCCTC ATACATCGAC GTCTAAGGCT
GACAGCCCCC AATCACCGGC CCCCCACGTT AGCAAGCGTG CGGTGTTACC TTGGATAGCT
GCCTTTTTAA AGCCTTATCG TACTAAAGTT ATCACTGCGA TTATTTTCCT GTTTATTGGT
TCATTGGCCT GGTTGTCACT GGGGCAAGGC GTGCGTCTAA TGGTTGATGA GGGTTTTTTA
AACGAGAACG GATCACGTCT AAATGAAATT ATCTTGCTAG TGATAGGCAT TACTGCGCTG
AGTAGCAGTG CTATTTTTTG CCGTTTTTAT TTAATGACTT GGCTCGGTGA GCGCGTTAGC
GCCGATATAC GTTTAAAAGT GTATGACCAT CTACTAAAGC TCTCTCCGGG GTTTTACGCC
AAGCTGAGAA CTGGTGAGAT CATCTCCCGC TTTACTGCCG ACTCAACCTT GCTGCAATCG
GTTGTTGGCT CGAGTCTGTC TATGATGCTA AGAGCCAGTG TGACCGTGAT TGGCGGTATC
GTAATGATGG CAATCACCAG CATTAAAATG ACCGGATTAG TACTATTAGC CGTGCCTATG
GTGCTGGGCC CCATCTTCTT CTTTGGGCGC AAGGTGCGTG ATTTATCGCG TAAGAGTCAA
GATAAGGTGG GTGACTTAGG CGCCTATGTG GATGAGACCT TACATGAGAT CCATACCGTG
CAGGCTTACT CCCATGAAGA CCAAGACCGA GCATTATTTA ATAACCGCGT CGAAGCTGTG
ATGGACGCCG CTAAGGGCAG GATTAAATAT CGATCGATAT TAATTTCCTT AGTGATGTTC
CTAAGTATCT TGGCTATTGC GCTAGTCACT TGGGTCGGTG CCCATGATGT GATGAGTGGT
GCGATTAGTG CTGGTGAGCT ATCGGCCTTT ATGTTCTATG CGGTCATGGT GGCAGGCTCA
GTGGCAACCA TCAGTGAAGT TATCGGTGAA ATACAGCGCG CAGCTGGTGC TACCGAGCGA
TTAATTGAGC TGATTGAAAC CCCTATTGAT ATTCCTGTTG TAGCAAGCCC ACTCGAGCTC
GTTACGCCTG TTCGCGGCGA CCTCAAGCTG AAACAAGTCC ACTTTAGCTA TAGCAATATG
GGGAATAACG AGAACCAGCC CGGTAGCGCA GATGCGAACA GCCTTGAGCA GGTTAACAGC
CCTGAGCGGA TTGGTGAGAG TAGCAGCCCT GAGCTTGAAA ATAGCCCTGA GCTTGAAAGC
AGCCTTGAGC GTATTAATGA GAGTAGCAGC CCTGAGCAGG TTAACAGCAC TGAGTCAATA
AAGAGCTCAG AGCGAGTTCC TAGCAACAGT GAAGATGAAG TCATTCGTGG CCTCAATATT
CATATTAAGC CTGGTGAGCG TGTCGCCTTA GTTGGCGCTA GCGGCGCGGG TAAAAGCACC
CTGTTTGAAC TGCTGCAGCG TTTTTATGTG CTGAATAGCG GTTCAATTGA ACTCGATGGT
GTCGATATCG CCAAGCTCAC GCCACAAACC TTGCGCCAGC AATATGCCTT AGTGCCACAA
GAGTCGGTGA TTTTTGCCAG CAGTGTATTA GATAATGTGC GCTATGGCCG CACCGATGCG
ACTGAAGAAG AGGTGAGACA AGCCTGTATT GCCGCAAAAG CCGATGAGTT TATTAGCGAG
TTTACAGATG GTTATCAAAC CTACTTAGGT GAGCGAGGCG TACGTTTATC CGGTGGCCAA
AAACAGCGTA TCGCCATTGC CCGAGCCATA TTAGCCGACC GACCGATTCT GTTACTAGAC
GAGGCCACAA GCGCGCTCGA TGCGGTGAGT GAGCACAAGG TAAAGCTGGC GCTCGACAGC
TTGATGGCAG GCAAAACCAC CTTAATCATC GCCCACAGGC TAGCCACAGT TATCAATGTT
GATCGCATAT TGGTATTGAA TAAGGGCCAA GTTGTCGCCA GCGGCACTCA TAGCGAGCTG
ATGCAAAGCA GTGAGCTATA CCAAGAGTTT GCCAGCTTGC AGCTGCTAAC TGATGACAGC
TAA
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| Protein sequence | MNQNASSVAK AEPHTSTSKA DSPQSPAPHV SKRAVLPWIA AFLKPYRTKV ITAIIFLFIG
SLAWLSLGQG VRLMVDEGFL NENGSRLNEI ILLVIGITAL SSSAIFCRFY LMTWLGERVS
ADIRLKVYDH LLKLSPGFYA KLRTGEIISR FTADSTLLQS VVGSSLSMML RASVTVIGGI
VMMAITSIKM TGLVLLAVPM VLGPIFFFGR KVRDLSRKSQ DKVGDLGAYV DETLHEIHTV
QAYSHEDQDR ALFNNRVEAV MDAAKGRIKY RSILISLVMF LSILAIALVT WVGAHDVMSG
AISAGELSAF MFYAVMVAGS VATISEVIGE IQRAAGATER LIELIETPID IPVVASPLEL
VTPVRGDLKL KQVHFSYSNM GNNENQPGSA DANSLEQVNS PERIGESSSP ELENSPELES
SLERINESSS PEQVNSTESI KSSERVPSNS EDEVIRGLNI HIKPGERVAL VGASGAGKST
LFELLQRFYV LNSGSIELDG VDIAKLTPQT LRQQYALVPQ ESVIFASSVL DNVRYGRTDA
TEEEVRQACI AAKADEFISE FTDGYQTYLG ERGVRLSGGQ KQRIAIARAI LADRPILLLD
EATSALDAVS EHKVKLALDS LMAGKTTLII AHRLATVINV DRILVLNKGQ VVASGTHSEL
MQSSELYQEF ASLQLLTDDS
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