Gene Spea_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3318 
Symbol 
ID5663706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4058662 
End bp4059276 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content48% 
IMG OID641237976 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001503168 
Protein GI157963134 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.3253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTA GTGCTTGGCT AGGCTTGTTA GCTATCTGCT GTTTAGGGGC CATGTCACCG 
GGGCCGAGTC TGGCTATGGT AGTGAGACAT ACCTTAGGTG GAGGTAGAGG TAAAGGCATC 
ATCTGCGCTT GGGCGCACTC AATTGGTATT GGTGTTTATG CTTTGCTGAC TTTATTAGGC 
TTAGCGGTAT TGCTAAAGCA GGCGCCTATG GTGTTTAACG GTATTGCGAT TATAGGTGCG 
CTTTATCTTG CGTATATGGG CGTGCAGGCG CTGCGCTCAA AAGGCGGCAT GTCAGATAAG 
CTAGCAGCTG GTGAGTCGAC CGATGTCTTT ACCGCGGCGC GTGATGGCTT AGCTATTTCA 
CTGTTTAACC CCAAAATAAT GTTGTTTTTT TTGGCGCTGT TTAGCCAGTT TGTGCTGGTT 
GCAGACAATA TGACGGGCAA GGTCTTGATT GTATTAACGC CGCTGATTGT TGATGGCCTT 
TGGTACACGC TTATCGCCTT ACTGCTTTCT CACTCGTCAG TGCTGCCTAA ACTTAGAGAA 
AAAGCAGCCC TAATTGATAA ACTATCGGGT GTAGTGCTTA TTTTGTTGGC GGTGCGAGTA 
GTTGTGACGC TTTAG
 
Protein sequence
MTISAWLGLL AICCLGAMSP GPSLAMVVRH TLGGGRGKGI ICAWAHSIGI GVYALLTLLG 
LAVLLKQAPM VFNGIAIIGA LYLAYMGVQA LRSKGGMSDK LAAGESTDVF TAARDGLAIS 
LFNPKIMLFF LALFSQFVLV ADNMTGKVLI VLTPLIVDGL WYTLIALLLS HSSVLPKLRE 
KAALIDKLSG VVLILLAVRV VVTL