| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3309 |
|---|
| Symbol | |
|---|
| ID | 5663697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4052297 |
|---|
| End bp | 4053148 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641237967 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001503159 |
|---|
| Protein GI | 157963125 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.461765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAA TTCAGCAATT AGAAGCCGAA GCTTTTACCA TTTTAGACTT ACACCTTAAA
AACGCTTTAT CAATGGCCGA TTCTGACAGC ATCACTCAGA TTGTTATTGG TCCACAGTGT
TTATGTGAAG CGGTATGCAT TGAGTTGGGA GCGGATATTC ATCAATTTAT TATGCTCAAT
GATGAGCAGT TTGAGCAAGG TTATGCCTTT GTCGAAGGCA TTATAGAAAG AGACCGTAGC
TCATTAATTG GTGATGTGAG TGGTATAGTT GGCTCGGTTA TCAACCCTAT AGGAAAGTGG
GTTAGAGACT CTGTTGGTGA GCAGTTAGCA GACGATCCTA TTTATATCGA ACTGCGCAAT
ATGTACCAAA CTTTTGGCAT GGATATCGTT CTGGGGATTT TCAGTGAATT GCTTAACCGT
GGCAATGAGC CGGATCTATT GATTGCAGCC ATGAGTAAAT GGCGTGAAGA GTTGGGTTAT
ATAGAAGGCT TTGACACCGA AGTCGAGCGT AACTTACTAG AGGGGATCGT CTCAGGTAAA
AACAACAGCG CGGAAGCTAA AAAAGCCGAG ATTGCCGGGT CTGTTGGTGG AGCGCTGGTG
GGGGCAAAAG TTGGCGCGGT TATGGGGTCA ATAGTACCAG GGGCTGGCAC CATAGTCGGG
GCGGCTGCAG GAGCGACTAT CGGTAAACAT TTTGGCGGAA AGGAACTGAA TAAGTGCGGC
CAAAATGAAG CCGTTAGCGA GGCTATTAAT GATGTTAGTG GTAGGGTTAA TGAAGTCAGT
AGTAGTGTCA GCAATGTGGC TAGCGATACA GTGAATAGTA TGAAAAACAA ATTTAATAAG
CTTTGGGCTT AA
|
|---|
| Protein sequence | MNQIQQLEAE AFTILDLHLK NALSMADSDS ITQIVIGPQC LCEAVCIELG ADIHQFIMLN
DEQFEQGYAF VEGIIERDRS SLIGDVSGIV GSVINPIGKW VRDSVGEQLA DDPIYIELRN
MYQTFGMDIV LGIFSELLNR GNEPDLLIAA MSKWREELGY IEGFDTEVER NLLEGIVSGK
NNSAEAKKAE IAGSVGGALV GAKVGAVMGS IVPGAGTIVG AAAGATIGKH FGGKELNKCG
QNEAVSEAIN DVSGRVNEVS SSVSNVASDT VNSMKNKFNK LWA
|
|---|
| |