Gene Spea_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3306 
Symbol 
ID5663694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4050287 
End bp4050862 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content49% 
IMG OID641237964 
ProductyecA family protein 
Protein accessionYP_001503156 
Protein GI157963122 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.146804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGTC TTCCTACATT GCGCATGGAT AAATTACTTG CAGCACTTAA TGCTGCTGAA 
ATTGGTCAGC ACCCAGTCGA AGTTCACGGT GCTCTTGTTG GGCTTATTTG TGGCGGAGTA
GAGCAAAGTG CCTCAGGTTG GACTCAACCG CTATTAGAGC TGATGAACGA TGGTCAAGCT
TTACCTAAAG AGTTGCAAGC GCTGATTGAA GAATTATATC AAGATGCGGT TACCCGCCTG
TCAGATACCG ACTTTGGCTT TAGCCCTATG CTGCCAGAAG AGGAGGAGCC ACTTTCTAAG
CGTGTCGAAG CCCTGTCCTT ATGGGTGCAA AGCTTCCTTA CGGGGATTGC TATTATTCAG
CCTAAGCTAA ATCAAGCACC ACTCGATGTG CGCGAAGTGA TTCAAGATCT GTCTGAGATT
GCCCAGGTGG AGTTTGATGT CGGTGAAGAC GAAGAATCAG AAGCGGCGCT CATTGAGCTA
ATGGAGTTTA CCCGTATGGC AGCACTCATG TGCTACGCCG AGTTTGGCCC AGCGGTTGAT
GACGACGAAC CCATCGACGT GGGTGTGCTT CACTAA
 
Protein sequence
MASLPTLRMD KLLAALNAAE IGQHPVEVHG ALVGLICGGV EQSASGWTQP LLELMNDGQA 
LPKELQALIE ELYQDAVTRL SDTDFGFSPM LPEEEEPLSK RVEALSLWVQ SFLTGIAIIQ
PKLNQAPLDV REVIQDLSEI AQVEFDVGED EESEAALIEL MEFTRMAALM CYAEFGPAVD
DDEPIDVGVL H