| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3303 |
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| Symbol | gcvT |
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| ID | 5663691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4046160 |
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| End bp | 4047254 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641237961 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001503153 |
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| Protein GI | 157963119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00589278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAACA AAACTGTACT TTTTAACAAG CACCTAGAAT CGAACGGCAA GATGGTAGAC
TTCCATGGTT GGGATATGCC ACTAAACTAC GGTTCACAAA TCGAAGAACA TCACGCAGTT
CGTCAAGACG CTGGTATGTT CGACGTTTCA CACATGACAG TAGTCGACGT GATTGGTGAT
GACGCTTGTG CCTTTTTACG CAAACTGCTA GCCAACGATG TCGCTAAGCT TAAAGTGCCT
GGTAAGGCAC TTTACGGCGG TATGCTTGAC CACAATGGCG GCGTTATCGA CGACCTTATC
ACTTATTACC TATCAGATAC CGAGTACCGT ATTGTTGTTA ACTCAGCAAC ACGCGAAAAA
GACCTCGCTT GGATAAACGA ACAAGTTAAA GGCTTCAGCG TCGAAGTGAC CGAGCGTCCA
GAGCTGGCGA TGATCGCCGT TCAAGGCCCA AATGCTAAGG CAAAAGCGGC TACCGTATTT
AACGATGCGC AAAACGCAGC AATCGAAGGC ATGAAGCCAT TCTTTGGTGT ACAAGCTGGC
TCACTGTTTA TCGCAACCAC TGGCTACACT GGTGAAACTG GCTACGAAGT TATCGTACCA
AATGATGAAG CCGAAGCACT ATGGCAAGCT TTCCTAGATG CGGGTATTAA GCCTTGTGGA
CTAGGTGCAC GTGACACATT ACGTCTCGAA GCGGGCATGA ACCTTTACGG CCTAGATATG
GACGAAAGCG TTAACCCACT TGCAGCCAAC ATGGGCTGGA CTGTGGCATG GGAGCCAGCG
GAACGTGACT TTAACGGTCG CCAAGCGCTA GAGAAGATTA AAGCAGAAGG TACAGACAAA
CTTGTTGGCC TAATCATGGA CGCTAAAGGC GTTATCCGTC ACGGCATGTC AGTGTTCTTT
ACCGACAGCG ACGGCGTTGA GCAGCAAGGT ACCATTACCA GCGGCACATT CTCGCCTACA
CTGGGTTACT CAATTGCCAT GGCTCGCGTA CCGCGCAGCA TTGGTGACGT GGCTGAAGTA
GAGATGCGTA AGAAGCGTGT ACCGGTAAAA GTTATCGCTC CGTCATTTGT GCGCAATGGT
AAGCAAGCCT TCTAA
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| Protein sequence | MANKTVLFNK HLESNGKMVD FHGWDMPLNY GSQIEEHHAV RQDAGMFDVS HMTVVDVIGD
DACAFLRKLL ANDVAKLKVP GKALYGGMLD HNGGVIDDLI TYYLSDTEYR IVVNSATREK
DLAWINEQVK GFSVEVTERP ELAMIAVQGP NAKAKAATVF NDAQNAAIEG MKPFFGVQAG
SLFIATTGYT GETGYEVIVP NDEAEALWQA FLDAGIKPCG LGARDTLRLE AGMNLYGLDM
DESVNPLAAN MGWTVAWEPA ERDFNGRQAL EKIKAEGTDK LVGLIMDAKG VIRHGMSVFF
TDSDGVEQQG TITSGTFSPT LGYSIAMARV PRSIGDVAEV EMRKKRVPVK VIAPSFVRNG
KQAF
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