Gene Spea_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3287 
Symbol 
ID5663675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4028175 
End bp4029875 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content50% 
IMG OID641237945 
Productputative monovalent cation/H+ antiporter subunit D 
Protein accessionYP_001503137 
Protein GI157963103 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0353953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGATGC TTGAGCTACC GCCCTTTACC CTATTCTTTA TAGGTGGGCT TATTGCTGCA 
ATGACCCGGG GCACACTGCG CGGCGCAATA ATGGTTGCCA TTCCTGTTAT TAGCGCCATT
CACCTGTGGA CAGTGCCTGA AGGTATTCAT CTACAGCTGA CGTTTTTAGA TTATGAGTTG
GTGCCATACC GCGCTGATAA ACTGAGCCTG ATGTTTGGCT ATGTATTTCA TATCGCCGCA
TTCATCTCCA TTATCTACTC GCTGCATGTC AAAGATAGCG TACAACAGGT CGCAGCCATG
CTCTATGCAG GTAGTGCGTT GGGCGCTGTA TTTGCGGGCG ATCTACTGAC TCTATTTATA
TTCTGGGAGC TACTCGCCTT TACCTCAGTG TTTTTAATCT GGGCGCGCAG AACGACCCGC
GCTTATCATG CAGGCATGCG CTACCTGATC ATTCAGGTCC TATCCGGTGT CATCTTGCTA
GTAGGCGCAC TATTTTACGC CGCTGAAACA GGCTCGCTAT CTTTTGAGTA TATTGGCCTA
GATAGTATCG CTGGCTGGCT GATCTTTATC GCCTTTGGTA TTAAATGTGC TTTTCCCTTT
GCCCATACTT GGCTCACCGA CGCCTACCCT GAAGCCACAC CAACGGGTAC CGTTATTCTC
AGTGCATTTA CCACTAAGGT AGCCGTTTAC GCACTGGCGC GCGCCTACCC AGGCACCGAG
CTATTGATAT ACATTGGCGC AGCCATGACC TGCTTCCCGA TCTTCTTTGC GGTGATTGAA
AATGATCTTC GCAGAGTCTT GGCCTATAGC CTGATAAACC AGGTGGGCTT TATGGTGGTA
GGTATAGGTA TTGGTACTGC ACTGGCAATC AACGGCGCAA TAGCTCATGC CTTCAACGAT
GTGATCTTTA AAGGCTTGCT GTTTATGAGC ATGGGCGCAG TGCTGCATAT GACTGGCAGA
ATCAACGGCT CGGATCTGGG CGGCCTGTAT AAAACCATGC CCAAGACCAC GATACTATGT
ATTATCGGCG CCGCCTCTAT CTCAGCCTTC CCACTGTTTA GCGGCTTTGT CAGTAAATCA
ATGGTGATGT CTGCCGCGCT TGAAACCGGT CATGACTGGG TCTGGTTGAT GTTACTGTTC
GCCTCTGCGG GTGTGTTCCA CCATGCAGGG ATCAAGATCC CCTACTTTGC ATTTTTCGCC
CACGACTCGG GGCTGCGCGC CAGCGATCCG CCGCGCAATA TGTTATTCGC CATGTTTATC
GCCGCCAGCC TGTGTATTGC CATCGGTATC TATCCTGCAG CGCTGTACTC ATTGCTGCCA
TATGATACGG GTTACAACCC TTATGATGCG ACCCACGTAT TGGCGCAGAC TCAGTTGCTG
ATGTTCTCAG CCCTGGCGTT TGTTTGGCTA AATCTCAGAG GCATGTATCC TCCCGAATTG
CGTTCAACCA ACTTGGATGT GGACTGGGTT TATCGCCGCG CTATTCCCAA CGTGCTACAA
AAACTGTTCG CGGTAATATG GAAAGCTGAT GGGGCGCTGC GCCAAGCTAT ACGAGGCAAA
CTAAGCCAAT ACCAGTCCAT TATTGCCAAC AAACATAAAG GCTTAGGAGG CTTGCTATCA
GGCTCATATC CTTCGGGTAA TATGGTGCTA TGGGTAGCCG TGCTGCTAGC GTCTTATCTG
TTTATGGGTT TTATTGGCTA G
 
Protein sequence
MWMLELPPFT LFFIGGLIAA MTRGTLRGAI MVAIPVISAI HLWTVPEGIH LQLTFLDYEL 
VPYRADKLSL MFGYVFHIAA FISIIYSLHV KDSVQQVAAM LYAGSALGAV FAGDLLTLFI
FWELLAFTSV FLIWARRTTR AYHAGMRYLI IQVLSGVILL VGALFYAAET GSLSFEYIGL
DSIAGWLIFI AFGIKCAFPF AHTWLTDAYP EATPTGTVIL SAFTTKVAVY ALARAYPGTE
LLIYIGAAMT CFPIFFAVIE NDLRRVLAYS LINQVGFMVV GIGIGTALAI NGAIAHAFND
VIFKGLLFMS MGAVLHMTGR INGSDLGGLY KTMPKTTILC IIGAASISAF PLFSGFVSKS
MVMSAALETG HDWVWLMLLF ASAGVFHHAG IKIPYFAFFA HDSGLRASDP PRNMLFAMFI
AASLCIAIGI YPAALYSLLP YDTGYNPYDA THVLAQTQLL MFSALAFVWL NLRGMYPPEL
RSTNLDVDWV YRRAIPNVLQ KLFAVIWKAD GALRQAIRGK LSQYQSIIAN KHKGLGGLLS
GSYPSGNMVL WVAVLLASYL FMGFIG