Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3287 |
Symbol | |
ID | 5663675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4028175 |
End bp | 4029875 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641237945 |
Product | putative monovalent cation/H+ antiporter subunit D |
Protein accession | YP_001503137 |
Protein GI | 157963103 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0353953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGATGC TTGAGCTACC GCCCTTTACC CTATTCTTTA TAGGTGGGCT TATTGCTGCA ATGACCCGGG GCACACTGCG CGGCGCAATA ATGGTTGCCA TTCCTGTTAT TAGCGCCATT CACCTGTGGA CAGTGCCTGA AGGTATTCAT CTACAGCTGA CGTTTTTAGA TTATGAGTTG GTGCCATACC GCGCTGATAA ACTGAGCCTG ATGTTTGGCT ATGTATTTCA TATCGCCGCA TTCATCTCCA TTATCTACTC GCTGCATGTC AAAGATAGCG TACAACAGGT CGCAGCCATG CTCTATGCAG GTAGTGCGTT GGGCGCTGTA TTTGCGGGCG ATCTACTGAC TCTATTTATA TTCTGGGAGC TACTCGCCTT TACCTCAGTG TTTTTAATCT GGGCGCGCAG AACGACCCGC GCTTATCATG CAGGCATGCG CTACCTGATC ATTCAGGTCC TATCCGGTGT CATCTTGCTA GTAGGCGCAC TATTTTACGC CGCTGAAACA GGCTCGCTAT CTTTTGAGTA TATTGGCCTA GATAGTATCG CTGGCTGGCT GATCTTTATC GCCTTTGGTA TTAAATGTGC TTTTCCCTTT GCCCATACTT GGCTCACCGA CGCCTACCCT GAAGCCACAC CAACGGGTAC CGTTATTCTC AGTGCATTTA CCACTAAGGT AGCCGTTTAC GCACTGGCGC GCGCCTACCC AGGCACCGAG CTATTGATAT ACATTGGCGC AGCCATGACC TGCTTCCCGA TCTTCTTTGC GGTGATTGAA AATGATCTTC GCAGAGTCTT GGCCTATAGC CTGATAAACC AGGTGGGCTT TATGGTGGTA GGTATAGGTA TTGGTACTGC ACTGGCAATC AACGGCGCAA TAGCTCATGC CTTCAACGAT GTGATCTTTA AAGGCTTGCT GTTTATGAGC ATGGGCGCAG TGCTGCATAT GACTGGCAGA ATCAACGGCT CGGATCTGGG CGGCCTGTAT AAAACCATGC CCAAGACCAC GATACTATGT ATTATCGGCG CCGCCTCTAT CTCAGCCTTC CCACTGTTTA GCGGCTTTGT CAGTAAATCA ATGGTGATGT CTGCCGCGCT TGAAACCGGT CATGACTGGG TCTGGTTGAT GTTACTGTTC GCCTCTGCGG GTGTGTTCCA CCATGCAGGG ATCAAGATCC CCTACTTTGC ATTTTTCGCC CACGACTCGG GGCTGCGCGC CAGCGATCCG CCGCGCAATA TGTTATTCGC CATGTTTATC GCCGCCAGCC TGTGTATTGC CATCGGTATC TATCCTGCAG CGCTGTACTC ATTGCTGCCA TATGATACGG GTTACAACCC TTATGATGCG ACCCACGTAT TGGCGCAGAC TCAGTTGCTG ATGTTCTCAG CCCTGGCGTT TGTTTGGCTA AATCTCAGAG GCATGTATCC TCCCGAATTG CGTTCAACCA ACTTGGATGT GGACTGGGTT TATCGCCGCG CTATTCCCAA CGTGCTACAA AAACTGTTCG CGGTAATATG GAAAGCTGAT GGGGCGCTGC GCCAAGCTAT ACGAGGCAAA CTAAGCCAAT ACCAGTCCAT TATTGCCAAC AAACATAAAG GCTTAGGAGG CTTGCTATCA GGCTCATATC CTTCGGGTAA TATGGTGCTA TGGGTAGCCG TGCTGCTAGC GTCTTATCTG TTTATGGGTT TTATTGGCTA G
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Protein sequence | MWMLELPPFT LFFIGGLIAA MTRGTLRGAI MVAIPVISAI HLWTVPEGIH LQLTFLDYEL VPYRADKLSL MFGYVFHIAA FISIIYSLHV KDSVQQVAAM LYAGSALGAV FAGDLLTLFI FWELLAFTSV FLIWARRTTR AYHAGMRYLI IQVLSGVILL VGALFYAAET GSLSFEYIGL DSIAGWLIFI AFGIKCAFPF AHTWLTDAYP EATPTGTVIL SAFTTKVAVY ALARAYPGTE LLIYIGAAMT CFPIFFAVIE NDLRRVLAYS LINQVGFMVV GIGIGTALAI NGAIAHAFND VIFKGLLFMS MGAVLHMTGR INGSDLGGLY KTMPKTTILC IIGAASISAF PLFSGFVSKS MVMSAALETG HDWVWLMLLF ASAGVFHHAG IKIPYFAFFA HDSGLRASDP PRNMLFAMFI AASLCIAIGI YPAALYSLLP YDTGYNPYDA THVLAQTQLL MFSALAFVWL NLRGMYPPEL RSTNLDVDWV YRRAIPNVLQ KLFAVIWKAD GALRQAIRGK LSQYQSIIAN KHKGLGGLLS GSYPSGNMVL WVAVLLASYL FMGFIG
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