| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3285 |
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| Symbol | |
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| ID | 5663673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4026289 |
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| End bp | 4027779 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641237943 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001503135 |
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| Protein GI | 157963101 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0676667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCACT CTTTGGATCT ATTGCTACAG CTAACCATTA TATTGCCGCT GCTTGCCACT
TTGGCGATCT TGGCAACGGG AAAGCACCCC AACCTTCGTG AGGCTGTAAC GATAAGCATC
AGCCTTGCCG TTATGTACTG TGTGATAAAC CTATATCAAG GGCTCAGTGC AGGCGCATCT
ATCGAGGTGT TTTGGTGGCA ACTGCTACCG GGCTTGGAAG TGAGCTTTGT GGTTGAGCCT
TTAGGTATGC TGTTTGCCCT CATTGCCAGC TTTCTGTGGC TCATTACCAC CCTATACGCC
ATCGGCTATA TGCGCGGCCA TGGGGAGGAG AATCAAACCC GCTTTTACCT CTGCTTTGCG
TTGGCCATAA GCGCAGTGAT GGGATTAGCA TTTTCCGCCA ACCTGTTTAC CCTGTTTATC
TTCTACGAAG TCTTGACCCT GTCCACCTAT CCTTTAGTGA CCCACGCTGG CACAGAAAAA
GCCAAGCAAG GGGGGCGCGT ATACTTAGGG ATCTTACTCG GGACCTCCAT CGCCTTCTTC
CTTTTAGCGA TTATCTTGAC CTGGTTTGTG GCCGGCACCT TAGACTTCAA ACCCGGCGGC
GTGTTTCACA CTGATGTTGA TACCAGCTTA CTGGGAGCCA TACTGGTACT GTTTGTGTTT
GGTATTGGTA AGGCGGCCAT CATGCCGTTC CATCGTTGGC TCCCCGCCGC TATGGTGGCG
CCAACACCGG TGAGTGCCCT GCTGCATGCG GTAGCTGTGG TCAAGGCTGG GGTGTTCACC
ATCTTAAAGA TCTGCGTGTT TATCTTTGGT ATCGAGCTAC TACCTACTCT GCCTACGACC
GAATTCCTGC TCTATTTAGC TGGCGCATCG GTATTGCTCG CCTCCATAGT GGCAATGCGT
CAGGATAACT TAAAAGCACG ACTCGCCTAC TCAACGGTGA GTCAACTGGG CTATATCACC
ATAGGCGCAC TGCTGGCCAC CTCATCAGGG GTCATTGGTA GCTCGATGCA TATTGCAACC
CACGCTTTTG GCAAGATCAC CCTATTCTTC TGTGCAGGCG CGATTCTGGT TGCGACCCAT
AAATCAAAAG TAAGTGAAAT GCGCGGCCTC GGCTTTACCA TGCCTGTCAC CATGGCGGCT
TTTTTTATCG CCAGTCTAAG TATTATTGGT GTTCCACCCG CAGGCGGTAC GTGGAGTAAG
TGGTTCCTGT TAATGGGCAC AATGGAAACC GAACATTGGG TCATTATGAT GGTGCTGATG
GTGAGCTCTC TGCTCAATAT CGCCTATCTT CTACCTATTC CATACCATGC CTTTTTCCCA
GGCAAGGGCC ATGCCGCAAC TAAGACTGGG ATCAAGGAAG CCCCTCTCAT GTCATTAATC
GCGCTGTCCA TCACCACCCT AGGTTGCTTG ATTCTATTCA TCTATCCGCA ACCCCTCTAT
GAGTTGGCAA AAACCATCTT AACTGTACCG GGAGTCAGCC ATGGACAATA A
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| Protein sequence | MNHSLDLLLQ LTIILPLLAT LAILATGKHP NLREAVTISI SLAVMYCVIN LYQGLSAGAS
IEVFWWQLLP GLEVSFVVEP LGMLFALIAS FLWLITTLYA IGYMRGHGEE NQTRFYLCFA
LAISAVMGLA FSANLFTLFI FYEVLTLSTY PLVTHAGTEK AKQGGRVYLG ILLGTSIAFF
LLAIILTWFV AGTLDFKPGG VFHTDVDTSL LGAILVLFVF GIGKAAIMPF HRWLPAAMVA
PTPVSALLHA VAVVKAGVFT ILKICVFIFG IELLPTLPTT EFLLYLAGAS VLLASIVAMR
QDNLKARLAY STVSQLGYIT IGALLATSSG VIGSSMHIAT HAFGKITLFF CAGAILVATH
KSKVSEMRGL GFTMPVTMAA FFIASLSIIG VPPAGGTWSK WFLLMGTMET EHWVIMMVLM
VSSLLNIAYL LPIPYHAFFP GKGHAATKTG IKEAPLMSLI ALSITTLGCL ILFIYPQPLY
ELAKTILTVP GVSHGQ
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