| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3284 |
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| Symbol | |
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| ID | 5663672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4024814 |
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| End bp | 4026292 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641237942 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001503134 |
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| Protein GI | 157963100 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.141551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGCAC ATCTGCCTAT TTTACAAGTC ATTGTGCCAC TGATGGCGGC ACCGCTATGC
TGGTTTCTAG ACCGCTCCAG ACTCGTGTGG CTGTTCGCCC TCTTAGTGAG CGGTTTTTCC
TGCCTAACCA GCATAGCCCT ACTGCAACAA GTGATGAGCT CCGGCACCAT TCTTTATCAG
CTTGGGGGCT GGGACGCGCC TTGGGGGATC GAATATCGCA TCGATGAGCT CAACGCCCTT
TTACTGCTGA TCATCTCAAC TATTAGTACC ATCGTCCTGT TTGCCGCACA AACCAGTCTT
CAAAAAGAGC TGCCTAAAGA GCGTCACACG CTGTTTTACA GCCTCTACCT GCTGTCATTG
ACTGGGATGT TCGGCATCGT CGCCACTGGC GATCTGTTTA ATGTATTCGT ATTTCTAGAG
ATCTCCTCGT TATCAGGCTA CGCCCTGATT GCTTTGGGCA AAGATAGACG CGCTCTTTGG
GCCGCCTACC AATATCTGAT CATGGGGACT ATCGGCGCGA CCTTTATTCT GATCGGCATC
GGTCTGCTGT ATCAGATGAC AGGCACGCTA AATATGGATG ATCTCGCCAA CCGGCTACCA
GAGGTTGACC AAACACGTAC CGTATTTGCC GCGTTTGCCT TCTTAATCGT TGGGGTCTGT
TTAAAGTTGG CACTATTTCC ACTGCATCTA TGGTTACCTA ACGCCTACGC CTATGCTCCT
TCAATAGTGA CTGCATTCCT CGCCGCTACG GCAACTAAAG TTGCGGTTTA CTTATTGATC
CGCTTCACCT ATACGATATT TGGCATCGAG CTTTCCTTCT CCATCCTGCC ACTGCAGAAC
TTATTTATGG TCCTCGGGCT GGTTGGCATA TTCGCCGCTT CTACTGCGGC GATATATAAA
ACCAATGTTA AACATATCTT TGCCTACTCG AGCATCGCTC AGGTTGGCTA CATGATTATT
GGCTACGCCA TCAACACCCC CACAGGGCTT ATGGCTACTC TGCTGCACCT GTTTAATCAC
GCCTTAATGA AGAGTGCGCT GTTTTTAGCG CTAGGCGCGG TGATGTACCG TATCGGCAGC
GTACAACTTA GCCAGTTCCA AGGGCTAGGA CGACAGATGC CGCTAACCAT GGCCGCCATA
GTTGTAGGCG GGTTAAGTTT GATAGGCGTC CCCCTGACAG TCGGTTTTAT CAGCAAGTGG
TATCTGCTCA TCGCCGCCGT TGAGGCTGGA ATGTGGCCAG TGGCGGTGTT GGTGCTACTC
GGTTCATTAC TGGCTGTGCT TTATATATGG CGAATCGTTG AAATCGCCTA TTTCAAGCCC
CCCGTACCGG GTCGTGAACC CGTCAAGGAA GCCCCTTGGA CCTTCCTTGT CCCGATTTGG
GTGCTGGTAC TGGCCAATAT CTATTTTGGC ATCGATACCC GCCTTAGTGT GCAGGTGGCA
CAGGCGGCCT CTCAAAGCTT GTTTGGAATT AACCCATGA
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| Protein sequence | MLAHLPILQV IVPLMAAPLC WFLDRSRLVW LFALLVSGFS CLTSIALLQQ VMSSGTILYQ
LGGWDAPWGI EYRIDELNAL LLLIISTIST IVLFAAQTSL QKELPKERHT LFYSLYLLSL
TGMFGIVATG DLFNVFVFLE ISSLSGYALI ALGKDRRALW AAYQYLIMGT IGATFILIGI
GLLYQMTGTL NMDDLANRLP EVDQTRTVFA AFAFLIVGVC LKLALFPLHL WLPNAYAYAP
SIVTAFLAAT ATKVAVYLLI RFTYTIFGIE LSFSILPLQN LFMVLGLVGI FAASTAAIYK
TNVKHIFAYS SIAQVGYMII GYAINTPTGL MATLLHLFNH ALMKSALFLA LGAVMYRIGS
VQLSQFQGLG RQMPLTMAAI VVGGLSLIGV PLTVGFISKW YLLIAAVEAG MWPVAVLVLL
GSLLAVLYIW RIVEIAYFKP PVPGREPVKE APWTFLVPIW VLVLANIYFG IDTRLSVQVA
QAASQSLFGI NP
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