| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3282 |
|---|
| Symbol | |
|---|
| ID | 5663670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 4023415 |
|---|
| End bp | 4024452 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641237940 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit B |
|---|
| Protein accession | YP_001503132 |
|---|
| Protein GI | 157963098 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000131968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACGG GGATCTATGG ATTACTCTCT GCAAGCTTTT TTGTTGTATT AGATGCTGTG
GATGTGGCCT TTACCGAAGC CTCTGTAGGC GCAGGTATAT CTGGTTTATT GATGCTGGCA
GCCATCAGCA TGACAGGCCG CACCGAGTCG CCTAAGCGTC ACAAGCCTTT ACTGGCTTTA
TTTGTGGTAC TTATCACAGG TGGCATGCTG ATCTACGGCA CCATGGATAT GCCTTACTTT
GGCAGTTTCG ATGCACCTAT TCATCAACAT GTCGCACCTC GTTACATTAA TGACTCGATG
CAGGAGGTCG GTGTACCCAA TATTGTCACC TCGGTACTCG CGAGCTACCG AGCATTTGAT
ACCTTAGGTG AGGTAGCCGT TATCTTTACT GCCGGCATTG GGGTGTTATC ACTCTTGGCA
TTGCCGCAAC GACGTAAGTC ATATCGCTTA GATGAGCCCA AAAAAGAGCA GATGTATCAG
CAGCATATCG TACTGCGAGT CATCAGCAAA GCCTTGATCC CTTTCATCCT GCTGTTTGCA
CTCTATGTGC AGTTCCACGG CGATTTTGGT CCCGGAGGGG GCTTTCAAGC TGGGGTGATC
TTTGCCGCAG CAATCATTCT CTATGCCATG TTATTTGGCT TAGACAATGC CAAGCGTGTC
TTTAGTCTAT CGCTGTTCCA ACTGCTCGCA GCTATCGGAC TCTTGCTATA CGCCAGTGTT
GGTGTGGTCT CGCTATTTAA CGGAGGTAAC TTCTTAGATT ACAACGTATT GGCCGACGAC
CCTATTGCTG GCCAGCACTT AGGTATTTTG CTGATCGAGC TTGGTGTGGG CTGCACCGTC
GCCTCAGTGA TGATCATTAT CTTTTTCAAC TTTGCCGGCC GCAGAGAAGC ACAACAGCAC
TCTACTAAAC AGAACTGTCA TGAACTAATC AGTCCAGAAC TAAACCGCAA TGTTCTAAAT
AGTACTGAGC TAAACAGTAC TGAACTAAAC AGTGCTGAGC TAAGCATTAC TGTACTAAAC
AACGGCGAGG TGAAGTAA
|
|---|
| Protein sequence | MLTGIYGLLS ASFFVVLDAV DVAFTEASVG AGISGLLMLA AISMTGRTES PKRHKPLLAL
FVVLITGGML IYGTMDMPYF GSFDAPIHQH VAPRYINDSM QEVGVPNIVT SVLASYRAFD
TLGEVAVIFT AGIGVLSLLA LPQRRKSYRL DEPKKEQMYQ QHIVLRVISK ALIPFILLFA
LYVQFHGDFG PGGGFQAGVI FAAAIILYAM LFGLDNAKRV FSLSLFQLLA AIGLLLYASV
GVVSLFNGGN FLDYNVLADD PIAGQHLGIL LIELGVGCTV ASVMIIIFFN FAGRREAQQH
STKQNCHELI SPELNRNVLN STELNSTELN SAELSITVLN NGEVK
|
|---|
| |