| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3276 |
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| Symbol | |
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| ID | 5663664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4019346 |
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| End bp | 4020491 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237934 |
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| Product | peptidase T-like protein |
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| Protein accession | YP_001503126 |
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| Protein GI | 157963092 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01883] peptidase T-like protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCTTTG TTCGTTTCGC AAAAAGAGTT CGCACACTGA TGCCAAATAT TAATCAAGAA
AGACTCGTTG AACATTTTAT CTCACTGGTG AGAATCGACA GTGAATCAGG CAATGAAAAA
GCGGTGGCAG AGGTGCTAAC AGAGCAGCTC GGTCAACTGG GCTTTGAGGT GACTCAACTT
GCTGTACCTA GCGAGATCAC TAACGGTTTT AATATCTATG GCAAGTTAAC CGGCTCACTT
GAAGGCAGCA TCGTTTTCAG TAGCCATATG GATACTGTGA CACCGGGTAT TGGTATTGAA
CCGATTATTG AAGATGGCAT TATTCGCTCT AAAGGCGACA CCATTCTAGG CGGCGATGAT
AAATCGGGTA TTGCGGCTGT GATGGAGGCG GTTCGCAGCA TTCAAGAGCG CGGCGAAGCC
CATAAAACCA TTGAAGTGGC GTTTACTGTG TATGAAGAAC GTGGCATGCA TGGTGCTAAG
AATTTTGATA TCAGTAAGAT TGAATCTAGC CAAGCTATCG TGCTCGATTC TGGCGGCCCT
ATTGGCACCA TTATCACCAC GGCGCCGGGC CAGCAAAGCC TAAAAGTGAC CATCAAGGGT
AAACCTGCCC ATGCGGGTCT TGAGCCTGAG GCTGGGATTA ACGCGTTAAC GGTTGCTGCA
GATGCCATCA GCAAAATGCA GTTGAGCCGT ATCGATGATG AAACCACGGC TAACATTGGT
GTAGTGCAAG GAGGCCAGGC AACCAATATC GTGATGCCTG AGCTGTATAT TGAGGCGGAA
GCGCGCTCAC TCGATGATGA CAAGCTGGCA AAGCAAGTGG CGCATATGGT GTCGACCTTT
GAGGCGGCGG CGCAAAAGCA TGGCGCTAGC GTTGAGATTG ATTCGACTCG CTCTTATAAC
GCTTATCATA TTGCGGATGA TGACGCCCAT GTGGTTGAGG TTAAAAATAC ATTTGCCGCC
ATAGGCATTG AGGCTATGAC TAAACCTACT GGCGGTGGAT CTGACGCCAA TATCTTTAAC
GCGAATGGCT TAAAGACGGT TAACTTGTCG ACGGGGATGT CGAAAGTTCA CACCACTGAT
GAGTTCATCG CGGTAGCCGA TTTGGCCGCA ATCACTGAAT TCGTTCACTG TTATCTGACC
CGCTAA
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| Protein sequence | MIFVRFAKRV RTLMPNINQE RLVEHFISLV RIDSESGNEK AVAEVLTEQL GQLGFEVTQL
AVPSEITNGF NIYGKLTGSL EGSIVFSSHM DTVTPGIGIE PIIEDGIIRS KGDTILGGDD
KSGIAAVMEA VRSIQERGEA HKTIEVAFTV YEERGMHGAK NFDISKIESS QAIVLDSGGP
IGTIITTAPG QQSLKVTIKG KPAHAGLEPE AGINALTVAA DAISKMQLSR IDDETTANIG
VVQGGQATNI VMPELYIEAE ARSLDDDKLA KQVAHMVSTF EAAAQKHGAS VEIDSTRSYN
AYHIADDDAH VVEVKNTFAA IGIEAMTKPT GGGSDANIFN ANGLKTVNLS TGMSKVHTTD
EFIAVADLAA ITEFVHCYLT R
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