Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3259 |
Symbol | |
ID | 5663648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3996613 |
End bp | 3998196 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641237918 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001503110 |
Protein GI | 157963076 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAG TTCAATATTC CGATTCCCTG CTGTCGGTGG TGCCACCACT GTTAGCCGTT ATCCTCGCCA TTACGACCCG CCGTGTACTG CTATCCTTAG GGGTTGGTAT TCTTGCCGGT GCCATACTGT TAAACAGCTA TAATCCGCTG AATGCACTTC ACTATCTGTT TAATATTGTC TCCGGGATCT TTTGGGCCGA TGGCGCTATC AATAGCGGCA ACGTCAATAT GTTACTGTTT ATGTTGCTGC TCGGTGGTTT GATCAGCCTG ATGACGGCTA CGGGGGCGAC CAGAGCCTTT GCTGAGTGGG GAGTGCGTCG TTGTAAAGAC CGCCGCAGTG CCAATATGCT TACCGGCTTA ATGGTCTTTG CCTTCTTTAT CGATGACTTT TTTCACAGTT TGTCAGTTGG CCCTATCTGC CGCCCGGTAA CGGATAGATT CCAGATCTCG CGGGCAAAGC TGGCTTATCT GCTGGATTCA ACTGCCGCGC CTGTGTGCGT CATCATGCCG ATCTCCTCTT GGGGCGCATT TATCATTGCG ATCTTAGGCG GTATTTTGGT GACAAATGGT ATTACCGATA TCAGCCCTAT TGCCATGTTT GTACAGATGA TCCCAATGAA CCTATATGCG GTGTTTACTC TGTTAATGGT ACTTGTCGTC ATTGCTTTTC AGCTCGACAT TGGCCCTATG CGTCAACATG AACGTTGGGC GCAAGAGGGC AAGCTGTGGG ATGAGTCTAA AGGACGCCCT AAAGGGCTTG AAATCACCAC CGAGGGGCAA GGCCGTGGTG GCATGATTGA TATGGTCTTA CCTATTGCGA CCTTAACCCT GTCGAGCATC TTCTTCATGG TGATGAGTGG CGCCGATGCC CTGTCGGCTA AGGGCCAAGC GTTTAGCTTG ATAGGCTCTC TTGAGCATAC CGATGTGGGC TCGTCCTTGG TATATGCGGC GCTGTGTAGT CTTGCCGTCT CTATCGTGCT CGCCCTGCGA TTAAAGTTGC CAGCAAAAAC ATGGTTATCT GCAGCGCCAC AAGGTGTTCA GGCTATGATG CCTGCGATTA TTATCCTGCT GTTTGCTTGG ACAATTGGTA CTGTGGTGAG CGATATGCAA ACTGGCCAAT ACTTAGCAGC GTTGACTAAG AGCAGCATTC CGGTTCAGCT TCTACCAGCC TTAGTGTTTG TTTTAGCATG CGGGATGTCA TTTGCCACCG GTACTAGCTG GGGCACGTTT GGCATCATGT TGCCACTGGC TGGTGATATC GCTATTGCCA GTGACGCAAG TCTATTAATG CCTATGCTTG CGGCGGTATT GGCTGGCTCT GTATTTGGTG ACCATAGCTC ACCTATATCG AGTACCAGTA TCTTATCGGC GACAGGCGCG AGCTGTCATC ATATGGACCA TGTTATGACC CAGCTGCCCT ATGCCGTTAC GGTTGCCTTT GGTGCCTTCC TCGGTTATCT GGCGATGGGC ATCACTGGCT CAACCCTTGC CGGTATTGCG GTGAGTAGCC TATGGTTTAT CGCGAACTGT GTATTCCATC TTCGTCGTCA TAAAAGACAG CAAATGCTAC CAGCTAATGC ATAG
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Protein sequence | MSLVQYSDSL LSVVPPLLAV ILAITTRRVL LSLGVGILAG AILLNSYNPL NALHYLFNIV SGIFWADGAI NSGNVNMLLF MLLLGGLISL MTATGATRAF AEWGVRRCKD RRSANMLTGL MVFAFFIDDF FHSLSVGPIC RPVTDRFQIS RAKLAYLLDS TAAPVCVIMP ISSWGAFIIA ILGGILVTNG ITDISPIAMF VQMIPMNLYA VFTLLMVLVV IAFQLDIGPM RQHERWAQEG KLWDESKGRP KGLEITTEGQ GRGGMIDMVL PIATLTLSSI FFMVMSGADA LSAKGQAFSL IGSLEHTDVG SSLVYAALCS LAVSIVLALR LKLPAKTWLS AAPQGVQAMM PAIIILLFAW TIGTVVSDMQ TGQYLAALTK SSIPVQLLPA LVFVLACGMS FATGTSWGTF GIMLPLAGDI AIASDASLLM PMLAAVLAGS VFGDHSSPIS STSILSATGA SCHHMDHVMT QLPYAVTVAF GAFLGYLAMG ITGSTLAGIA VSSLWFIANC VFHLRRHKRQ QMLPANA
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