Gene Spea_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3259 
Symbol 
ID5663648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3996613 
End bp3998196 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content50% 
IMG OID641237918 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_001503110 
Protein GI157963076 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAG TTCAATATTC CGATTCCCTG CTGTCGGTGG TGCCACCACT GTTAGCCGTT 
ATCCTCGCCA TTACGACCCG CCGTGTACTG CTATCCTTAG GGGTTGGTAT TCTTGCCGGT
GCCATACTGT TAAACAGCTA TAATCCGCTG AATGCACTTC ACTATCTGTT TAATATTGTC
TCCGGGATCT TTTGGGCCGA TGGCGCTATC AATAGCGGCA ACGTCAATAT GTTACTGTTT
ATGTTGCTGC TCGGTGGTTT GATCAGCCTG ATGACGGCTA CGGGGGCGAC CAGAGCCTTT
GCTGAGTGGG GAGTGCGTCG TTGTAAAGAC CGCCGCAGTG CCAATATGCT TACCGGCTTA
ATGGTCTTTG CCTTCTTTAT CGATGACTTT TTTCACAGTT TGTCAGTTGG CCCTATCTGC
CGCCCGGTAA CGGATAGATT CCAGATCTCG CGGGCAAAGC TGGCTTATCT GCTGGATTCA
ACTGCCGCGC CTGTGTGCGT CATCATGCCG ATCTCCTCTT GGGGCGCATT TATCATTGCG
ATCTTAGGCG GTATTTTGGT GACAAATGGT ATTACCGATA TCAGCCCTAT TGCCATGTTT
GTACAGATGA TCCCAATGAA CCTATATGCG GTGTTTACTC TGTTAATGGT ACTTGTCGTC
ATTGCTTTTC AGCTCGACAT TGGCCCTATG CGTCAACATG AACGTTGGGC GCAAGAGGGC
AAGCTGTGGG ATGAGTCTAA AGGACGCCCT AAAGGGCTTG AAATCACCAC CGAGGGGCAA
GGCCGTGGTG GCATGATTGA TATGGTCTTA CCTATTGCGA CCTTAACCCT GTCGAGCATC
TTCTTCATGG TGATGAGTGG CGCCGATGCC CTGTCGGCTA AGGGCCAAGC GTTTAGCTTG
ATAGGCTCTC TTGAGCATAC CGATGTGGGC TCGTCCTTGG TATATGCGGC GCTGTGTAGT
CTTGCCGTCT CTATCGTGCT CGCCCTGCGA TTAAAGTTGC CAGCAAAAAC ATGGTTATCT
GCAGCGCCAC AAGGTGTTCA GGCTATGATG CCTGCGATTA TTATCCTGCT GTTTGCTTGG
ACAATTGGTA CTGTGGTGAG CGATATGCAA ACTGGCCAAT ACTTAGCAGC GTTGACTAAG
AGCAGCATTC CGGTTCAGCT TCTACCAGCC TTAGTGTTTG TTTTAGCATG CGGGATGTCA
TTTGCCACCG GTACTAGCTG GGGCACGTTT GGCATCATGT TGCCACTGGC TGGTGATATC
GCTATTGCCA GTGACGCAAG TCTATTAATG CCTATGCTTG CGGCGGTATT GGCTGGCTCT
GTATTTGGTG ACCATAGCTC ACCTATATCG AGTACCAGTA TCTTATCGGC GACAGGCGCG
AGCTGTCATC ATATGGACCA TGTTATGACC CAGCTGCCCT ATGCCGTTAC GGTTGCCTTT
GGTGCCTTCC TCGGTTATCT GGCGATGGGC ATCACTGGCT CAACCCTTGC CGGTATTGCG
GTGAGTAGCC TATGGTTTAT CGCGAACTGT GTATTCCATC TTCGTCGTCA TAAAAGACAG
CAAATGCTAC CAGCTAATGC ATAG
 
Protein sequence
MSLVQYSDSL LSVVPPLLAV ILAITTRRVL LSLGVGILAG AILLNSYNPL NALHYLFNIV 
SGIFWADGAI NSGNVNMLLF MLLLGGLISL MTATGATRAF AEWGVRRCKD RRSANMLTGL
MVFAFFIDDF FHSLSVGPIC RPVTDRFQIS RAKLAYLLDS TAAPVCVIMP ISSWGAFIIA
ILGGILVTNG ITDISPIAMF VQMIPMNLYA VFTLLMVLVV IAFQLDIGPM RQHERWAQEG
KLWDESKGRP KGLEITTEGQ GRGGMIDMVL PIATLTLSSI FFMVMSGADA LSAKGQAFSL
IGSLEHTDVG SSLVYAALCS LAVSIVLALR LKLPAKTWLS AAPQGVQAMM PAIIILLFAW
TIGTVVSDMQ TGQYLAALTK SSIPVQLLPA LVFVLACGMS FATGTSWGTF GIMLPLAGDI
AIASDASLLM PMLAAVLAGS VFGDHSSPIS STSILSATGA SCHHMDHVMT QLPYAVTVAF
GAFLGYLAMG ITGSTLAGIA VSSLWFIANC VFHLRRHKRQ QMLPANA