Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3236 |
Symbol | |
ID | 5663625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3968235 |
End bp | 3969122 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237895 |
Product | band 7 protein |
Protein accession | YP_001503087 |
Protein GI | 157963053 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACAAA AATCAAAACT TAGCCAATTT TTCAAATCGG CTTCAGTGGT AAAGCTACTA CCGCTTGCAC TCATAATCAT CGCCATCTTT AACTCCTACT TCATCGTTAT TGAAGGTCAT GTCGGCGTAG TGAAACGCTT TGGCGAAGCC AAGGATCAAC AAAATCCTGG TTTACACTTT AAGATCCCCT TTATTGAAAC CGTCGAGATG ATTGAAGTGC GTACCCGTAA GAATGCCGAG AAAATGGCCT CTAGTACTAA AGAACAGATG CCAGTAACAA TTGAGGTTTC GGTTAACTGG ACAGTTAATA AAGAAGCCGC GTTAGAGTTA TTTAAACGTT ACGGCGGCCT TACTCAATTT GAACAACGCA TTCTGGACCC GCGTTTTCGC TCGGCAACCA AAGACACTAT CCCTCAATTT GAAGCAGAGC AGCTTATACA AGACCGAGCC AGTGCAATTC AGGGCATCGA GCGTCGCTTA GCCGAAGAAA TGGAAGGCTT CCCTGTTGTG GTCGATAACA TTCAAATTGA AAACATTATT CTGCCGCAAA AATACATTAA CTCGATTGAA ATCAAGCAGA CAGAAAAGAA CCTTGCTGCC GCTGAGGAGC ATAAGCTTGA GCGTCAACGC CTTGAAGCAT TAAGAGCAGT AAACACCGCC GATGCACGAG CGAAAGGCAT TCTTAAAGTG GCTGAGGCCG AAGCGCAATC CATACTGCTA AAAGGTAAAG CTGAGGCACA GGCAATTGAA GCCAAAGCTA AGGCACTTAA GAACAATCCA TTGATTGTTA AACTTACTGA AGCACAAGCA TGGGACGGCA GATTACCTAT GACTATGATG GGCGAAGGCG CGATGCCCAT TATGGATCTT CGCGACGCAA GCAAGTAA
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Protein sequence | MLQKSKLSQF FKSASVVKLL PLALIIIAIF NSYFIVIEGH VGVVKRFGEA KDQQNPGLHF KIPFIETVEM IEVRTRKNAE KMASSTKEQM PVTIEVSVNW TVNKEAALEL FKRYGGLTQF EQRILDPRFR SATKDTIPQF EAEQLIQDRA SAIQGIERRL AEEMEGFPVV VDNIQIENII LPQKYINSIE IKQTEKNLAA AEEHKLERQR LEALRAVNTA DARAKGILKV AEAEAQSILL KGKAEAQAIE AKAKALKNNP LIVKLTEAQA WDGRLPMTMM GEGAMPIMDL RDASK
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