Gene Spea_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3218 
Symbol 
ID5663607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3944366 
End bp3944644 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content43% 
IMG OID641237877 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001503069 
Protein GI157963035 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCA CCGCAGCTGC ATTACACATA CTTGTTAAGC ACCAAACACT TGCTGAAGAT 
ATTATCAAAC AGCTCAATAA AGGCGCTAAA TTTGACGTAC TCGCCAAGAA GCATTCTACA
TGCCCATCGG GTAAGAAAGG CGGCAGCTTA GGCGAATTTA AGAAAGGCCA AATGGTGCCG
CAATTTGATA AAGTTTGCTT TACAGGTGAG TTAATCACTC CGCACTTAGT AAAAACTAAA
TTCGGTTGGC ATGTTATAAA GGTCCTCTAC AGGACCTAG
 
Protein sequence
MARTAAALHI LVKHQTLAED IIKQLNKGAK FDVLAKKHST CPSGKKGGSL GEFKKGQMVP 
QFDKVCFTGE LITPHLVKTK FGWHVIKVLY RT