| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3214 |
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| Symbol | |
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| ID | 5663603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3940661 |
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| End bp | 3941380 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641237873 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001503065 |
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| Protein GI | 157963031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTAG ATAAATTTAT CTGTAAGAGT ACCGAGCTTA ATCGCAAGCA CGCTAGCGAT
TGTATCGAGC GCGCGGAAGT GAGCGTTAAC GGCGAGGTCA TTACTGATGT GCGCTTTCAG
GTACATGAAA GTAACGAGGT GCGCTATAAG GGGCAAAGGT TAGTTGCGAG GCCGTCGCGC
TACATCATGC TGCATAAGCC GATACATACC TTAAGCTCAA ATGTCGATGG TGATTACCCA
AGCCTATTTC GCTGTATCGA TATTGACAGG GTTGAGGATT TACATATTGT GGGTAGGCTC
GATGCCGACA CCACGGGCTT AGTGTTACTG ACCGATGATG GTCGCTGGTC ATTCGATATT
ATTCGCCCCG ACAAACAGTG TGCAAAAACC TACCGGGTGA TGCTCAGAGA TCCCATTGCT
GGAGATGTAG CAGCCGATGT TATCGCAAGG TTTGAGGCTG GCCTACAACT GCAAAATGAG
CAGGCGTTAA CCCTACCTGC GAAACTTGAG ATTGTTGCGC CTAGAGAGGT GTTACTCACC
ATCACCGAGG GCAAGTATCA CCAGGTAAAG CGTATGTTTG CCGCGGTGGG CAATCGCGTT
ATCGGTTTAC ACAGAGAACA AATTGGTGAT TTAAGCTTAG ATTTAAAGGT CGGTGAGTGG
CGTTATCTTT CTGATACCGA GGTGAAGCGA TTGTCGACTC CTACGCCTAG CGGTGACTGA
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| Protein sequence | MRLDKFICKS TELNRKHASD CIERAEVSVN GEVITDVRFQ VHESNEVRYK GQRLVARPSR
YIMLHKPIHT LSSNVDGDYP SLFRCIDIDR VEDLHIVGRL DADTTGLVLL TDDGRWSFDI
IRPDKQCAKT YRVMLRDPIA GDVAADVIAR FEAGLQLQNE QALTLPAKLE IVAPREVLLT
ITEGKYHQVK RMFAAVGNRV IGLHREQIGD LSLDLKVGEW RYLSDTEVKR LSTPTPSGD
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