| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3209 |
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| Symbol | |
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| ID | 5663598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3934041 |
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| End bp | 3935234 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237868 |
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| Product | TonB family protein |
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| Protein accession | YP_001503060 |
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| Protein GI | 157963026 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.909373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTAT GGATGGCGCA GCAGACCCTT TTACTCTCAT TAGTATGTGG CGGCTTACTC
TTGAGTCACC GTTTATTGCA GCAACACCTT GGCGCCCACA GAACCTATCA TTTGTGGCTA
GCCATTCCCG CTCTGCTCAT CAGCTCAGCC ATAATGGTAA TGCTTCCCTC TCCTCTTAGT
GCAGTGCAAG CCAACCAACT TGCTCACTAC AGCGTGATGG CGGGCAAGGC AATCTCTGCC
GTACAAACCA CAGATTATGC GAACTTATTA CTGCTTACAT GGTTAGTTGG CGTAGGAATT
ATGTTCATCC TACTACTATT ACAAGCCATA GGGTTGAAAC GGATATTGCG TACAGCAATC
CCCCTTGAGC ATCAAGATGC AGCGCTGCCA ACACTGCAAC ACCCTAGTGT GCAGTCGCCC
ATGCTGGTCG GTATTAGCAA TGCAAAAATC TTACTTCCAA CTAGTTTTAA TCGCTTGTCG
GATGATGAGC GGCAGTCAAT TATCGCTCAT GAACAATACC ACCATCAGCG CCGAGACCTA
ATCAGCAATC TACTCGCCTA CTTAACCCTA ACGGTTTTCT GGTTCAATCC TCTATGCTGG
CTGGCTTACC GACGCTTTAG AGACGATCAA GAGTTGTCTT GCGATGCCCA TGTCACCCGA
GCGTTAAGCA AGCAACAAAA AATCAGTTAT AGCCAAGTGC TATTAGCCTA CTCCCAGCAA
GCTCATCACG GCCTGCTACA CACTCACTAT GGAAATAAAA ACATACTCAA GGAGCGAATA
ATGCAAATGA AAACCTCTCA GAAAGGACAA AGTGGCTTAG CCATTATAGG CCTCACTATC
TGCCTCGGAC TAAGTGGCCT ACTACTGAAC CAACAGGTAC AGGCTGGTGC GCACGAGCAT
AATGAGGTTC ATCCCTTAAC CCGTGTTGAA CCTAAATATC CAATTTCGGC AGTCGAGGCT
CACCAGAGCG GCTTTGTGAA GCTTAAGTTT GATATCAGCC CTAGCGGCGC AGTAAGTAAT
GTCAGCGTGA TTAAGTCATC GCCAGAAGCT GTATTTGATA AGTCAGCAGT TACCGCACTT
GAGCAATGGC GCTATAAAGA GTCAACCAAG GGATTCAAAG GCGCAAAAGT GCAGCTCGAT
TTTATGATTG AGCCACCGGC AACCGATGTT GAGCGCATTA AAGTGACGCC TTAA
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| Protein sequence | MMLWMAQQTL LLSLVCGGLL LSHRLLQQHL GAHRTYHLWL AIPALLISSA IMVMLPSPLS
AVQANQLAHY SVMAGKAISA VQTTDYANLL LLTWLVGVGI MFILLLLQAI GLKRILRTAI
PLEHQDAALP TLQHPSVQSP MLVGISNAKI LLPTSFNRLS DDERQSIIAH EQYHHQRRDL
ISNLLAYLTL TVFWFNPLCW LAYRRFRDDQ ELSCDAHVTR ALSKQQKISY SQVLLAYSQQ
AHHGLLHTHY GNKNILKERI MQMKTSQKGQ SGLAIIGLTI CLGLSGLLLN QQVQAGAHEH
NEVHPLTRVE PKYPISAVEA HQSGFVKLKF DISPSGAVSN VSVIKSSPEA VFDKSAVTAL
EQWRYKESTK GFKGAKVQLD FMIEPPATDV ERIKVTP
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