| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3202 |
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| Symbol | |
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| ID | 5663591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3924911 |
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| End bp | 3927181 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237861 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001503053 |
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| Protein GI | 157963019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAA ATAGTTTGGG TTTTCCACGC ATTGGTCGTT TTCGTGAATT AAAGTTTGCC
TTAGAGAAGT ATTGGCGTGG TGAAATTGAA CAATCTCAAT TAACTGATAT ATCGAGAGAT
TTGCGTAAGT CACACTGGCA GTGGCAGGCA GATGCTGGGG TGAAATTATT ACCTGTTGGT
GATTTTGCTT TTTATGATCA AGTATTAACA TTGAGTGCAA CTTTAGGGGC AATTCCTGAA
CGGCACCGTG GAGATGCAGG CATAGATATC GACACACTAT TCCGAGTCGG ACGTGGTAGA
GCACCAACAG GTAATGATGC GCCAGCAGCT GAAATGACCA AGTTTTTTAA CACTAACTAC
CACTATATTG TGCCTGAGTT GACAGCGGAT CAAACTTTCG AAATTGGCTA TGATCAGCTG
TTTGAAGAAG TGAGCGAAGT ACAAGCCCTT GGCTATCAAG CTAAGCCGGT TATTCTTGGG
CCGGTATCAT TTCTATATCT GTCTAAATCG GTGGGCTCAG ATTTTGATAG ATTAAGTTTA
TTGCCACAGC TTTTAGAAAC ATATCAAAAA ATACTGACTC GCTTTAACAG CCAAGGCGTT
GAATGGATCC AGCTCGATGA GCCGGTGCTA GCGTTGGAGC TTGAAAGTGA TTGGCAAGCA
GCGATAAGTC AAACCTATAC GGCATTAACC GAGGGCGACT TGAAGGTATT ATTAGCCAGC
TACTACGGCA GTATTGCTCA TCAGCACTCG TTGGTGTCTA AGCTTCCTGT TGCAGGTTTA
CACCTTGATT TAGTCACGGC GCCACAGCAG TTAAGCACAT TTGTCGCCAC CTTAGGCCAA
GAGCAAGTCT TGTCTGCCGG TGTGATTAAT GGTCGTAATG TGTGGGCGGC AGATCTAGAT
AATATTGCAG CGCAGCTAAG CAGTGTGGCT CGCGATCTCA AGCAACGTTT ATGGTTAGCG
CCATCGTGCT CTCTACTTCA TAGTCCAGTC GATCTCGAAG TCGAAACAGC GTTGTCACCT
GTGCTTAAAC AGCAGCTTTC ATTTGCAAAA CAGAAGCTGA CAGAGCTGAG TAAGTTGAAA
ATATTATTAA ATGATGCTGA TTCGGTTGAG GCTAAAGCCA TTGTCGTGGA GTGTCGCTCA
AGACGCAGTG CTCGCGCCGA AGCGGCCAAT CAACAGGTGA TAGCCAGAGT CACGGCTTTA
ACAGAGCAGG ACTATGAGCG TGACGATCTG TTTGCTGTTA GGCAGGCGGC GCAAAGACAG
AAATTTAGGC TACCGTTACT GCCTACCACG ACTATCGGTA GTTTCCCGCA AACACTAGCC
ATTCGTGGCC TGCGTAGCCG CTGGCGTAAA GGGGAGATAA GCCTTGAGCA ATATAACGAC
CAGCTTCGAC AAGTGACTCG CGACACCGTT GAGCGTCAGC TAAAGCTTGG TATCGATGTA
CTGGTTCATG GTGAAGCAGA GCGCAATGAC ATGGTGGAAT ACTTCGGCGA ACAGCTCGAT
GGTGTGGGTT TTACGCAGTT TGGTTGGGTA CAAAGTTATG GTTCGCGCTG CGTTAAGCCG
CCGCTAATCT ATGGTGATGT GTCACGTCCT GCGGCAATGA CGGTGCAGTG GGCTGAATTT
GCTCAGAGCC TCACCGACAA ACCCGTTAAA GGCATGCTGA CAGGTCCTGT TACCATTTTG
CATTGGTCGT TTGCCCGTGA AGATATCAGT CGCGAGCAGA TCGCGACCCA AATTGGTCTA
GCCATTCGAG ATGAAGTGGT CGAGCTGCAG AATGCGGGGA TAGGCATCAT TCAAATTGAT
GAGCCAGCAT TTCGTGAAGG GCTGCCGCTG AAGAAGAGCG ATTGGCAGCA TTACCTTAAC
TGGGCGGTTA ATGCCTTTAA ATTAAGTGCA GCAGGCGTGA CAAACGAAAC GCAGATCCAC
ACTCATATGT GCTACAGCGA ATTTAACGAA ACCATAGCGG CAATTGCGGC GATGGACGCC
GATGTGATTA CCATAGAGAC ATCCCGTTCA AGAATGGAGC TGTTAAATGC ATTTGAAGAT
TTTAATTATC CGAATGAAAT TGGTCCGGGT GTTTACGATA TTCATTCACC GAATACGCCA
ACGGTCGATG AGATTGTTAG CTTGATGCAG AAGGCAGCGC AAAAGGTACC TGTAGAGCAA
CTTTGGGTAA ATCCGGATTG TGGCCTGAAG ACCCGCACCT GGGATGAAGT TGAGCCAGCC
TTGGTTAACC TTGTCGCGGC AACGAAAATT TTAAGACGTA CACTGAGCTA A
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| Protein sequence | MQLNSLGFPR IGRFRELKFA LEKYWRGEIE QSQLTDISRD LRKSHWQWQA DAGVKLLPVG
DFAFYDQVLT LSATLGAIPE RHRGDAGIDI DTLFRVGRGR APTGNDAPAA EMTKFFNTNY
HYIVPELTAD QTFEIGYDQL FEEVSEVQAL GYQAKPVILG PVSFLYLSKS VGSDFDRLSL
LPQLLETYQK ILTRFNSQGV EWIQLDEPVL ALELESDWQA AISQTYTALT EGDLKVLLAS
YYGSIAHQHS LVSKLPVAGL HLDLVTAPQQ LSTFVATLGQ EQVLSAGVIN GRNVWAADLD
NIAAQLSSVA RDLKQRLWLA PSCSLLHSPV DLEVETALSP VLKQQLSFAK QKLTELSKLK
ILLNDADSVE AKAIVVECRS RRSARAEAAN QQVIARVTAL TEQDYERDDL FAVRQAAQRQ
KFRLPLLPTT TIGSFPQTLA IRGLRSRWRK GEISLEQYND QLRQVTRDTV ERQLKLGIDV
LVHGEAERND MVEYFGEQLD GVGFTQFGWV QSYGSRCVKP PLIYGDVSRP AAMTVQWAEF
AQSLTDKPVK GMLTGPVTIL HWSFAREDIS REQIATQIGL AIRDEVVELQ NAGIGIIQID
EPAFREGLPL KKSDWQHYLN WAVNAFKLSA AGVTNETQIH THMCYSEFNE TIAAIAAMDA
DVITIETSRS RMELLNAFED FNYPNEIGPG VYDIHSPNTP TVDEIVSLMQ KAAQKVPVEQ
LWVNPDCGLK TRTWDEVEPA LVNLVAATKI LRRTLS
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