| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3200 |
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| Symbol | |
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| ID | 5663589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3921955 |
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| End bp | 3924012 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237859 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_001503051 |
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| Protein GI | 157963017 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAATAT TAAAACAGAT TATTCTGGTG TGTTTATTAG CATTAGCTAA TCCGGTATTT
GCCCAGTCAA CAGGCTGGCT AGAGAACCCT AATCACCCGC CAGTAAAAGT GAGGTTTATG
CTCACGGGGG AGGTCGATAA GGCCAGTAAC ACAGTGCCTG GGGTGCTGGA AGTTGAGCTC
GATGGTGAGT GGAAAACCTA TTGGCGTAGC CCTGGTGAGG GCGGCATTGC GCCGAGTATC
GACTGGAGTG GCTCAAGCAA CTTAAACCAA GTCGATTGGG ACTGGCCTGC ACCTGAGCAA
TTCTCGCTAC TTGGTCTACA AACCTTTGGT TATCACCATG AGGCTGCTTT TCCTATGCAG
CTGCAACTCG ATGATACAAA TAAGCCCACT CATTTACAGG GTAAATTTAC CCTGTCGTCA
TGCACTAATG TGTGTGTATT AACAGATTAT GAGCTTAACC TAGATATCGA CCCCACTGCA
TTAAATGCTG ATGTTGACGC CATGTTTGCC TACAACAAAG CCGTGTCTAA AGTACCGGTT
AAATTGCAGC GAGAAGATGT CACGCTTGGT TGGGATGTAA AAGCGCAGCA ACTGCAAGTG
GAGATGGATG ATACTGGTTG GAGCATGCCA AAATTTATTA TCGATGGTGA GCCTGATACC
ACCTTTAAGT TTGTGCGGTT CGAGCGTTAT GACACCGATA GCGGCCAGCA AAAGCTACGA
GCTATCTTTG ATGCAACAAG CTGGCTAGGT GAGCCTGAGC TCATTGGTAA GTCGTTAAAC
CTTACGGTGA TGGATAAAGA GCAGGCATTA GAGTTTGTTG CAAACGTTAG CGGCATCACC
ATTCAAGCTA GCGGCCATTC GCTACTGAGC ATGCTAGTTA TCGCGCTATT AGGTGGCCTG
ATTTTAAATG TCATGCCCTG CGTGTTACCG GTTCTAGGCA TGAAATTAAG TTCAGTGATA
GCGGCGCCAA ATCTACAAGT TAAGCAAATC CGCCAGCAGT TTATCGCCTC TGCCTTGGGG
ATTTTAGTGT CATTTTGGTT GCTTGCAGGA TTTATCTTAA TCCTTAAATT TACCGGGCAG
GCGATAGGTT GGGGGGTACA GTTCCAAAAC CCTTGGTTTA TTGGTTTTAT GGCGGTAGTT
ACCGCGATAT TTGCCATCAA TATGTTGGGC GCGTTTGAGA TTAACTTACC ATCGAGTTTG
CAAACTAAGT TGGCAACCAC TGGCGGTAAT GATCACCGCG GACATTTCTT GCAAGGCATG
TTTGCGACCT TACTTGCGAC GCCGTGCAGC GCACCATTTC TTGGTACTGC GGTGGCCTTC
GCCCTTGGCG CTGACGTATT GAGTCTATTT GTTATCTTTA GCGCCTTAGC GCTAGGCATG
GCGTTACCTT GGTTGCTAGT GGCTGCGTTT CCTCAAGTTG CGCGTTATTT CCCTAAACCG
GGCCGCTGGA TGAGTGTGGT TAAAGTGGTG TTCTCCGGCC TCTTGGTACT GACTAGTCTG
TGGCTACTTA GTCTGTTAGC CAACTTTATA CCGGCTGCTT ACTTGTGGAT TGCGGCTGGC
ACTTTAGTAC TGTTGTTTTT AGTGTTGATG GCCAAAGTTC AAGGAAAAGC TGCTGTTATC
GCCAGTGTCA GCGTCGGAAT TATGGTGATA GCCGTTGGGG CATTTTCTAC ATCTAACAGG
TGGGCGCAGC CGTTACCAAC CGACTTAGAA TGGCATATGT TGAATGAGCC TGAAATCGCG
AGACAAGTTG CGGCAGGCAA GACCGTATTT GTCGATGTGA CTGCCGATTG GTGTATTACC
TGTAAAGCCA ACAAGGTTGG GGTGATCTTA CAAGATCCGG TATACAGCGA ATTAAAGGCT
GACAATATCG TGTTGATGGA GGGGGAGTGG ACTAAACCAT CGAAGCCAAT AACCGAGTAT
TTACAGAGCC ATAACCGCTT TGGTGTGCCC TTTAACGTGG TTTACGGCCC GAATGCGCCA
GAGGGGATTG CACTGCCAGT GATCTTGTCT GCCAGCGATG TTATCGATGC TATCAATGTG
GCCTCGGTAA GGTTCTAA
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| Protein sequence | MKILKQIILV CLLALANPVF AQSTGWLENP NHPPVKVRFM LTGEVDKASN TVPGVLEVEL
DGEWKTYWRS PGEGGIAPSI DWSGSSNLNQ VDWDWPAPEQ FSLLGLQTFG YHHEAAFPMQ
LQLDDTNKPT HLQGKFTLSS CTNVCVLTDY ELNLDIDPTA LNADVDAMFA YNKAVSKVPV
KLQREDVTLG WDVKAQQLQV EMDDTGWSMP KFIIDGEPDT TFKFVRFERY DTDSGQQKLR
AIFDATSWLG EPELIGKSLN LTVMDKEQAL EFVANVSGIT IQASGHSLLS MLVIALLGGL
ILNVMPCVLP VLGMKLSSVI AAPNLQVKQI RQQFIASALG ILVSFWLLAG FILILKFTGQ
AIGWGVQFQN PWFIGFMAVV TAIFAINMLG AFEINLPSSL QTKLATTGGN DHRGHFLQGM
FATLLATPCS APFLGTAVAF ALGADVLSLF VIFSALALGM ALPWLLVAAF PQVARYFPKP
GRWMSVVKVV FSGLLVLTSL WLLSLLANFI PAAYLWIAAG TLVLLFLVLM AKVQGKAAVI
ASVSVGIMVI AVGAFSTSNR WAQPLPTDLE WHMLNEPEIA RQVAAGKTVF VDVTADWCIT
CKANKVGVIL QDPVYSELKA DNIVLMEGEW TKPSKPITEY LQSHNRFGVP FNVVYGPNAP
EGIALPVILS ASDVIDAINV ASVRF
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