| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3171 |
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| Symbol | |
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| ID | 5663560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3885702 |
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| End bp | 3886247 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641237830 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001503022 |
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| Protein GI | 157962988 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCCAA GGCCGCTTCT AGAACCTGAA CTAATAGATA AAGCCAAGCT AGGTGACAAG
CTCGCTTTCA AGCAACTGTA TCAACTGCAT CATCAGCGCG TATACGCACT GTGTTTGAGG
ATCACCGGCC AGGTATCACT GGCCGAGGAA GCGACACAGG ACTGCTTCGT CAGGCTTTGG
CAGAAGCTGC CCCAGTTTCG TGGTGAGAGT CAATTCACCA CTTGGCTGCA CAGTCTGAGT
GTCAACCAAG CCCTATCTAG CCTGAAGAAG CACCGCTCCT TTTGGTCACG ATTTGTGAGT
AGTGATACCG ATGTTGAAAG TATCAGCGAT GAGTATGAAG ACTTAGATAA GATTTTACTC
AAGCTGCCTG AGCGAGCCCG GATCGTTTTC GTACTGCATG CGCTCGAAGG CTACAAACAC
CAAGAGGTGG GGCAACTTAT GGGCATTGCA GCAGGCACGA GTAAGGCGCA ATACCACAGG
GCACAAAAGT TACTCGAAGC ACTTATAGAT CAAGGCCAAG TCGATATAGG AGGCCGTAAT
GAATGA
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| Protein sequence | MEPRPLLEPE LIDKAKLGDK LAFKQLYQLH HQRVYALCLR ITGQVSLAEE ATQDCFVRLW
QKLPQFRGES QFTTWLHSLS VNQALSSLKK HRSFWSRFVS SDTDVESISD EYEDLDKILL
KLPERARIVF VLHALEGYKH QEVGQLMGIA AGTSKAQYHR AQKLLEALID QGQVDIGGRN
E
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