Gene Spea_3162 details

Gene Information

• Locus tag: Spea_3162
• ID: 5664819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 3872842
• End bp: 3873405
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 641237820
• Product: hypothetical protein
• Protein accession: YP_001503013
• Protein GI: 157962979

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000000326454
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACTGA TGGGTTCTAG GCGTCATCGG CGTCAATTCA TTTTAACCAT GGATAGAAAA 
ATGATTAAAA CAATAAAAAT AGGCTGCGTT AAACTTCAGC TTCCCACCTA CAGCGCTGCG 
TTGGTTAGCA CGTTTCTGCT ATTGGGCTTA TCTGCTTCAT CATCCCAAGC CAACATTATC 
TACACTTGGG TCGATGCCAA TGGCGTCACT CACTATAGTC AGCAGCCTCC GGAAGATGAT 
CAAACGCCTA CTCATACAGA TAAGCTATAT AGTGACGATC TTAAACCTAA GCAAATAGGT 
ACTGTCGCTC CTTCACCTCC CATTGTTAAA AATCAAGCTC AAACCGATTT AGAGAAAACG 
GCAGCAGCGA TAAATCAGGC GGATTCTGCT CAAGCAAAGC AGATCTGTGA AAATGCTCGT 
CACAGCCTTA ACGTACTGAC TACTCATGCA AAGCTAAATA AGAAAAATAA ACAGACTGGT 
GAAGTCGTCG CGATGACCGA AGAACAAAGG CAGGCTTCGA TCTCGGAACA GAAAGAGAGA 
ATTAAGCTAT TTTGCACGGA TTAG 

 

Protein sequence

MILMGSRRHR RQFILTMDRK MIKTIKIGCV KLQLPTYSAA LVSTFLLLGL SASSSQANII 
YTWVDANGVT HYSQQPPEDD QTPTHTDKLY SDDLKPKQIG TVAPSPPIVK NQAQTDLEKT 
AAAINQADSA QAKQICENAR HSLNVLTTHA KLNKKNKQTG EVVAMTEEQR QASISEQKER 
IKLFCTD