| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3156 |
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| Symbol | |
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| ID | 5663545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3860859 |
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| End bp | 3861824 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237809 |
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| Product | lipoyl synthase |
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| Protein accession | YP_001503007 |
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| Protein GI | 157962973 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000010408 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGGC CTGAAAGATT ACAACCTGGC GTTAAACTAA GAGACGCAGA CAAGGTTTCC
CGCATTCCAG TGAAAGTGGT GCCATCTGAA CGTGACACCA TGTTGAGAAA GCCTGACTGG
CTTCGAGTTA AGCTACCAGC ATCAAATCAG CGCATTACTG ATATTAAGCA AGCCCTGCGC
AAAAATGGCT TGCACTCTGT ATGTGAAGAG GCATCTTGTC CAAATCTATC TGAGTGTTTC
AACCACGGTA CTGCTACCTT CATGATTTTA GGTGCCATCT GTACCCGCCG TTGCCCATTT
TGCGATGTAG CTCATGGCCG CCCGCTAAAA CCTGATGCCG AAGAACCGAA GAAACTAGCG
CAAACCATCA AAGACATGAA GCTTAAATAC GTGGTCATCA CCTCTGTAGA CCGTGATGAC
TTGCGTGACG GTGGCGCGCA GCATTTTGCA GACTGTATTC GCGAAATTCG CTTACTCAAC
CCAGAAATTA AGATTGAAAC CTTAGTACCT GACTTCCGCG GCCGTATCGA TGCAGCGCTT
GAGATCTTAG CAACCGAGCC ACCTGATGTG TTTAACCACA ACTTGGAAAC GGCGCCGATG
CATTACCGTA AGGCTCGCCC AGGTGCTAAT TATCAATGGT CATTAGATCT ATTGAAGAAG
TTTAAAGAGC GTCACCCTAA CATTCCGACT AAATCAGGTC TGATGATGGG TCTTGGTGAG
ACTAACGAAG AGATTGCTCA AGTATTGCAT GATCTACGAG CTCACAACGT TGAGATGCTA
ACCTTAGGTC AGTACTTACA GCCTTCTAAA TTCCATCTAC CAGTAGAGCG CTATGTATCA
CCAGCAGAAT TTGATGAGCT AAAAGAACTG GCCGAAAGCA TCGGCTTTAC CCATGCAGCA
TGTGGTCCAC TGGTACGCTC AAGCTACCAT GCAGATCTTC AAGCACAAGG TAAAGAAGTT
AAATAG
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| Protein sequence | MNRPERLQPG VKLRDADKVS RIPVKVVPSE RDTMLRKPDW LRVKLPASNQ RITDIKQALR
KNGLHSVCEE ASCPNLSECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDAEEPKKLA
QTIKDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRLLN PEIKIETLVP DFRGRIDAAL
EILATEPPDV FNHNLETAPM HYRKARPGAN YQWSLDLLKK FKERHPNIPT KSGLMMGLGE
TNEEIAQVLH DLRAHNVEML TLGQYLQPSK FHLPVERYVS PAEFDELKEL AESIGFTHAA
CGPLVRSSYH ADLQAQGKEV K
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