Gene Spea_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3155 
SymbollipB 
ID5663544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3860207 
End bp3860866 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content46% 
IMG OID641237808 
Productlipoate-protein ligase B 
Protein accessionYP_001503006 
Protein GI157962972 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000390793 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACGATA ACGCTTTGCA TATTCGTCAT CTAGGTAAAC AAGATTACGA ATCAGTGTGG 
CACGCGATGC AGCACTACAC AGATAATCGC GATGAGAACA GCCAAGATGA GATCTGGATT 
GTTGAACATA CGCCAGTTTT CACTCAAGGC CAAGCAGGTA AGAGTGAGCA CATTTTAAAC 
CCTGGTGATA TTCCTGTTAT ACAGGTAGAC CGTGGTGGTC AGGTGACTTA CCACGGCCCT 
GGACAACTCG TAGTTTACCC TCTTCTCGAT ATTAAACGCC TTAAAGTGGG TGTACGTCAG 
CTCGTCACTC ACATTGAACA GAGCATCATT AACATGCTCA AACGTTATCA GATTGAAGCT 
TATGCCAAAG CTGATGCGCC AGGTGTTTAT GTTGAAGAAC GAAAAATAGC ATCACTCGGT 
CTTAGGATCC GTAAAGGGTG CTCTTTCCAC GGATTGGCCC TCAATGTCGA TATGGATATG 
TCACCATTTC AGCGCATAAA CCCTTGTGGT TACGCTGGCA TGGAAATGAT CCAATGCAAA 
CAGCTCGGTG GACCACAAAC TGTCGAAGAG GCAGGTGCCC AACTGATCGA AACCCTTAGC 
CAAGAACTCG GTTTAGATAA GCTAGTTCAC CACCAAGGAT TACCAGAGTC ATATGAATAG
 
Protein sequence
MYDNALHIRH LGKQDYESVW HAMQHYTDNR DENSQDEIWI VEHTPVFTQG QAGKSEHILN 
PGDIPVIQVD RGGQVTYHGP GQLVVYPLLD IKRLKVGVRQ LVTHIEQSII NMLKRYQIEA 
YAKADAPGVY VEERKIASLG LRIRKGCSFH GLALNVDMDM SPFQRINPCG YAGMEMIQCK 
QLGGPQTVEE AGAQLIETLS QELGLDKLVH HQGLPESYE