| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3137 |
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| Symbol | |
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| ID | 5663526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3841468 |
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| End bp | 3842895 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237790 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001502988 |
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| Protein GI | 157962954 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.21345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AACTCCATAT TAAAACTTGG GGCTGTCAAA TGAATGAGTA TGACTCATCT
AAGATGGCTG ATCTTCTTGA CGAATACGAA GGTTACACAT TAACAGACAA TGCTGAAGAA
GCTGACGTGC TGCTTTTAAA TACCTGCTCT ATTCGTGAGA AAGCACAGGA GAAAGTGTTT
CATCAGCTAG GGCGCTGGAA AACATTAAAA GATAAAAAAC CTGGGCTGAT TATCGGCGTT
GGTGGTTGTG TTGCCTCACA AGAAGGTAAG GCTATTAAGG AACGTGCTCA GTGCGTAGAC
CTTATTTTTG GCCCGCAAAC CTTACATCGT TTACCTGAAA TGATCGATCA GATCAAAGAC
GGTAAAAAAG CGGTTATCGA CGTGAGCTTC CCAGAAGTTG AGAAGTTTGA CCGTCTTCCG
GAACCGCGGG CCGAAGGTCC AAGTGCTTTC GTATCAATTA TGGAAGGCTG TAGCAAATAC
TGCTCTTTCT GTGTGGTGCC TTACACTCGT GGTGAAGAAG TTAGCCGTCC ATTGGACGAT
GTGATTCTTG AAATCGCCCA ACTCGCAGAG CAAGGCGTGC GTGAAGTTAA TCTACTTGGC
CAAAACGTAA ACGCTTATCG TGGTGCAACC CACGATGATG AGATCTGTAC TTTTGCAGAA
CTTTTACGTT ACGTAGCTGC AATTGATGGT ATTGACCGTT TACGCTTTAC CACCAGCCAC
CCAATTGAGT TTACGCAAGA TATTATTGAT GTGTATGAAG ACACACCAGA GCTTGTAAGC
TTCTTACACT TACCAGTGCA ATCAGGTTCA GACTTGATCC TAACGCAAAT GAAACGTGGA
CACATGGCAA TCGAATATAA GTCGATTATC CGCCGTTTAC GTAAAGCTCG TCCAGATATC
CTAATCAGCT CTGATTTCAT CATCGGCTTC CCAGGTGAAT CTAAGCAAGA CTTCGCTGAT
ACCATGAAGT TGATTGAAGA CATACAGTTT GACCATAGCT TTAGCTTTAT CTACAGCGCA
CGCCCAGGAA CCCCAGCTGC GGATCTTCCA GATAATGTTA GTCTTGATGA GAAAAAAGAG
CGTCTTGCTA TCTTGCAAGA CCGTATCACT CAACAAGCTA TGCGTTATAG CCGTCAAATG
GTCGGAACTG TACAACGCAT CTTAGTTGAA GGCCCATCGG TTAAGAACCC AATGGAGCTT
CGCGGCCGTA CTGAAAACAG TCGTGTGGTA AACTTTGAAG GCCTGCATGA ACATATCGGT
AAGTTTGTCG ACGTAGAGAT TGTTGACGTA TATACCAACT CTCTTCGCGG CGTGTTTATC
CGCGGTGAAG ATGAAATGGA CTTGCGTCGT GATTTACGTC CATCTGACAT CACTGCAAAA
TATAAGCAAG CTGATGACTT AGGTGTGACC TTGTTTACCC CGGCTTAA
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| Protein sequence | MSKKLHIKTW GCQMNEYDSS KMADLLDEYE GYTLTDNAEE ADVLLLNTCS IREKAQEKVF
HQLGRWKTLK DKKPGLIIGV GGCVASQEGK AIKERAQCVD LIFGPQTLHR LPEMIDQIKD
GKKAVIDVSF PEVEKFDRLP EPRAEGPSAF VSIMEGCSKY CSFCVVPYTR GEEVSRPLDD
VILEIAQLAE QGVREVNLLG QNVNAYRGAT HDDEICTFAE LLRYVAAIDG IDRLRFTTSH
PIEFTQDIID VYEDTPELVS FLHLPVQSGS DLILTQMKRG HMAIEYKSII RRLRKARPDI
LISSDFIIGF PGESKQDFAD TMKLIEDIQF DHSFSFIYSA RPGTPAADLP DNVSLDEKKE
RLAILQDRIT QQAMRYSRQM VGTVQRILVE GPSVKNPMEL RGRTENSRVV NFEGLHEHIG
KFVDVEIVDV YTNSLRGVFI RGEDEMDLRR DLRPSDITAK YKQADDLGVT LFTPA
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