Gene Spea_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3134 
Symbol 
ID5663523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3838700 
End bp3839326 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content46% 
IMG OID641237787 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_001502985 
Protein GI157962951 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000686708 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGGCAA AACTTAAGTT AGGCAATAAC AGACTAGGTA CTATGAGCAA TATTAAACTG 
ATAGTTGGGC TTGCAAACCC CGGCGCGCAG TATGAACGGA CTCGTCATAA TGCTGGCGCG 
TGGTACGTTG AAGAACTCGC TAGAGTCTGT GGTGCCACAT TAACACTAGA CAGTAAATAC 
TTTGGCATGA CAGCGAGAGT GACGCTGCAT GGTAAAGATG TACGTCTACT TATACCGACG 
ACCTTTATGA ATTTAAGCGG AAAGTCGGTA GGGGCGTTAG CGAACTTTTT TCGCATCGCC 
CCAGAAGAGA TTTTAGTAGC GCACGATGAG CTAGATATGC CACCGGGTGT TGCAAAGTTT 
AAGTTGGGCG GTGGTCACGG TGGTCATAAC GGTCTTAAAG ATATCATTGC AAAATTAGCG 
AATGATAAAG GCTTCTACCG ATTACGCATC GGCATAGGCC ATCCTGGTGA TAAGAGTCAG 
GTGAGCAATT ATGTGCTGAG TAAGGCCTCC CCAACAGATC AAGAACTGAT GGACGCTGCG 
ATTGATGAAG CGGTACGTTC GACAGAAGTC TTGTTCAACC AAGATATGGC AAAGGCGATG 
CATAGACTGC ATTCTTTTAA AGCATAA
 
Protein sequence
MAAKLKLGNN RLGTMSNIKL IVGLANPGAQ YERTRHNAGA WYVEELARVC GATLTLDSKY 
FGMTARVTLH GKDVRLLIPT TFMNLSGKSV GALANFFRIA PEEILVAHDE LDMPPGVAKF 
KLGGGHGGHN GLKDIIAKLA NDKGFYRLRI GIGHPGDKSQ VSNYVLSKAS PTDQELMDAA 
IDEAVRSTEV LFNQDMAKAM HRLHSFKA