| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3133 |
|---|
| Symbol | |
|---|
| ID | 5664814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3837555 |
|---|
| End bp | 3838646 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641237786 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | YP_001502984 |
|---|
| Protein GI | 157962950 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000505872 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTCA AATGTGGCAT CGTAGGCCTG CCAAACGTTG GTAAATCAAC ACTTTTCAAC
GCACTAACTA AAGCTGGTAT CGAAGCGTCA AACTTCCCGT TCTGTACAAT TGAGCCTAAT
ACAGGTGTTG TTCCTGTACC TGACACTCGT CTAGACGCAT TGGCTGCAAT TGTTAAGCCT
GAGCGTGTAT TGGCGACAAC TATGGAGTTC GTTGACATCG CGGGTCTAGT TGCCGGTGCA
TCTAAAGGTG AAGGTCTAGG TAACAAGTTC CTAGCTAACA TCCGTGAAAC CGATGCTATT
GGTCATGTGG TTCGTTGTTT TGAAGATGAC AACATTGTTC ACGTTGCTAA TAAAGTAGAT
CCAGCAAGTG ATATCGAAGT GATTAACACT GAGCTAGCGT TAGCTGACCT TGACTCATGT
GAGCGTGCTA TTACACGTCA AGCTAAACGT GCTAAAGGCG GCGACACTGA AGCTAAGTTT
GAAGTGGCCG TACTTGAGAA AATGCGTCCA GTATTAGACG AAGGCAAAAT GCTACGTTCT
ATGGAGCTTA CTAAAGAAGA GTTAGCAGCC ATTGGCTACC TAAACTTTTT AACGCTTAAG
CCTACCATGT ATATTGCTAA CGTGGCTGAA GATGGTTTTG AGAATAACCC ACACTTAGAT
ACTGTTAAAG CACTTGCTGC AGAAGAAAAC GCAGTCGTTG TTGCAGTTTG TGCAGCCATT
GAATCTGAGC TTGCTGAAAT GGACGCGGAA GACCGTGAAG AGTTCATGGC AGATCTTGGT
CTAGAAGAGC CTGGTCTTGA TCGCGTGATC CGTGCAGGTT ACGATCTACT AAGTCTACAA
ACCTATTTCA CTGCTGGTGT AAAAGAAGTA CGTGCTTGGA CTGTAAGAAT TGGCGCGAGT
GCACCACAGG CAGCCGGTGT TATCCATACT GACTTTGAAC GTGGCTTTAT CCGTGCTCAA
GTTATGGCTT ACGACGACTT CATTACTTAT AAGGGTGAAG CCGGCGCGAA AGAGGCGGGT
AAGTTACGCG TAGAAGGTAA GACCTATACC GTAAAAGATG GCGATGTAAT GCATTTCCTA
TTTAACGTAT AA
|
|---|
| Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTKAGIEAS NFPFCTIEPN TGVVPVPDTR LDALAAIVKP
ERVLATTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFEDD NIVHVANKVD
PASDIEVINT ELALADLDSC ERAITRQAKR AKGGDTEAKF EVAVLEKMRP VLDEGKMLRS
MELTKEELAA IGYLNFLTLK PTMYIANVAE DGFENNPHLD TVKALAAEEN AVVVAVCAAI
ESELAEMDAE DREEFMADLG LEEPGLDRVI RAGYDLLSLQ TYFTAGVKEV RAWTVRIGAS
APQAAGVIHT DFERGFIRAQ VMAYDDFITY KGEAGAKEAG KLRVEGKTYT VKDGDVMHFL
FNV
|
|---|
| |