| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3128 |
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| Symbol | |
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| ID | 5663517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3831568 |
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| End bp | 3832227 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237768 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_001502979 |
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| Protein GI | 157962945 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000339408 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAATT TGAGACGCAT CACAAAAAAC ACTTATCTCT GGGTGATACT GGGCACTCTT
TTAGTTAGCG GTTGCTCAAC TACCATACCA GACAACCTAG TTCCCGTCTC TGTTAACAAA
GTACAACAGG CTGACGCATG GGAAATGCAA GGTAAGCTTG CGGTGAGAAC GCCCCAAGAT
AAATTCAGTA CTAATCTGTA TTGGTTACAT AGCCCTGATC ATGATGAATT GAAGCTAACC
ACTATGCTTG GAACAACAGT GCTATCACTG TCGAGTCGAG CTGGAGAAGC CACACTAGAA
GTCGATGGCA AAACCTACAA GGATAGCGAC CCCCAGCGAT TACTCACCCG AGTATCAGGT
TGGTCCATAC CTATTAAGTC ACTGCCACTT TGGATCACAG GCCAACTAAC AGTTGGCGAC
AAACTGCTAG CCAAAGATGC TCAGGGTCGT CCGGCTAAAC TGGTTAATGC CGAACAACAG
CCTCCCTGGG AAGTCGAATT TAACAGCTGG CAAACTCAAA GCGGTGCAGA AGTGCCAAGA
TTACTTAACC TGCAGCGTGG TGAGATTCGC CTAAAATTAC AGCTGAGTCA GTGGCAAGCT
TTAGCACCAC AAAGCCAAAC GCTTTTCCAA CAGACGTCAC CAACTGAGAA CTCTTTATGA
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| Protein sequence | MNNLRRITKN TYLWVILGTL LVSGCSTTIP DNLVPVSVNK VQQADAWEMQ GKLAVRTPQD
KFSTNLYWLH SPDHDELKLT TMLGTTVLSL SSRAGEATLE VDGKTYKDSD PQRLLTRVSG
WSIPIKSLPL WITGQLTVGD KLLAKDAQGR PAKLVNAEQQ PPWEVEFNSW QTQSGAEVPR
LLNLQRGEIR LKLQLSQWQA LAPQSQTLFQ QTSPTENSL
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