Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3126 |
Symbol | prfA |
ID | 5663515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3828949 |
End bp | 3830034 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237766 |
Product | peptide chain release factor 1 |
Protein accession | YP_001502977 |
Protein GI | 157962943 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000819953 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGACA GTGTGATTCG TAAGCTTGAA GGCTTACTTG AACGTAATGA AGAAGTGTTG GCGTTACTGA GTGATGCAGG CGTTATTGCC GATCAGGAAC GTTTCCGCGC CTTGTCTAAA GAATATTCTC AACTAGAGGA TGTAGTCAGT ACCTTTAAGT CTTTTCAGCA AGCCGAGGAA GATCTCGAGT CAGCTAAAGA GATGATGGAA GAGGATGACC CAGAGCTTAA AGAGATGGCT CAGGAAGAAT ATAAAGTCGC TAAGTCGGCG ATAGCAGCGC TTGAAGATGA GTTGCAGATC TTATTGCTTC CAAAAGATCC GAATGACGAC AATAACTGTT TTATCGAAAT CCGCGCTGGC GCGGGTGGTG ATGAAGCGGC TATTTTTGCG GGTGATTTGT TCCGCATGTA TAGCAGATAC GCCGAAAGTA AGCGCTGGCA GATAGAAGTT ATGAACACCA ACGAAGGTGA GCATGGCGGC TTTAAAGAAG TGATCGCTAA AATCAGTGGC GAAGGTGTTT ACGGTAAGCT GAAATTTGAA TCTGGCGGAC ACCGTGTACA ACGTGTACCT GAGACCGAGT CTCAAGGCCG CGTACATACT TCAGCTTGTA CTGTGATTGT ACTGCCTGAA GTACCAGAAG CAGAAGCGAT TGAAATTAAC AAGGCCGACT TGAAAGTGGA TACTTTCCGC GCATCAGGTG CTGGTGGACA GCACGTTAAC AAAACTGACT CAGCTATTCG TATTACCCAT ATTCCAACAG GTATCGTTGT AGAGTGTCAG GATCAGCGTT CACAGCATAA AAACCGTGCC CAAGCGATGA GCGTGCTTGC CGCGCGTATC CAAGCTGTTG AAGACGAGAA GCGTCGTAGT GCTGAAGAAA GTACACGCCG TAACTTGGTG TCATCAGGTG ATCGTTCAGA ACGTATTCGT ACTTATAACT TCCCACAAGG TCGTGTAAGT GAGCACAGAA TTAACTTAAC TCTGTACCGC TTAGGCGAAT TTATGGAAGG TGACATCGAT TGTGTTGTAG AACCACTGAT CCAAGAAAAC CAAGCGGATA TGCTTGCAGC ACTGGGTGAA GGCTAA
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Protein sequence | MKDSVIRKLE GLLERNEEVL ALLSDAGVIA DQERFRALSK EYSQLEDVVS TFKSFQQAEE DLESAKEMME EDDPELKEMA QEEYKVAKSA IAALEDELQI LLLPKDPNDD NNCFIEIRAG AGGDEAAIFA GDLFRMYSRY AESKRWQIEV MNTNEGEHGG FKEVIAKISG EGVYGKLKFE SGGHRVQRVP ETESQGRVHT SACTVIVLPE VPEAEAIEIN KADLKVDTFR ASGAGGQHVN KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLAARI QAVEDEKRRS AEESTRRNLV SSGDRSERIR TYNFPQGRVS EHRINLTLYR LGEFMEGDID CVVEPLIQEN QADMLAALGE G
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