| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3124 |
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| Symbol | |
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| ID | 5663513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3827378 |
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| End bp | 3827773 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641237764 |
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| Product | invasion gene expression up-regulator SirB |
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| Protein accession | YP_001502975 |
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| Protein GI | 157962941 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.129569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACTT TTTACAGTTT GTACCCAGCG TTTAAGCACA TGCACATGAC GCTTATTGCG
ACTAGCGTAT TGTTTTTCTT AGTCCGTTTC GTACTGCATA TGCGCAAGTC ACCCGTATTA
GAAAAGAAAG CAATTAAAAT TGCGCCGCAC GTTATCGATA CCTTCCTACT GTTATCTGGT
TTGATCTTAT GTTTCTCAAT CAAACAGTAT CCTTTTGTTG ATCCATGGAT GACTGAAAAG
TTGGGTGCCG TTGTTGCTTA CATCGTGTTG GCTACCATCG TGCTAAAAGC AAATCGTAAT
ACATTATTTA AAGTCTTTGC AGCCTTTGGT GCAATCGGTT GGGTTGTTTA TGCCGCTAAA
CTTGCGATCC TTAAGCAAGG GGTGTTGCTC GGTTAA
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| Protein sequence | METFYSLYPA FKHMHMTLIA TSVLFFLVRF VLHMRKSPVL EKKAIKIAPH VIDTFLLLSG
LILCFSIKQY PFVDPWMTEK LGAVVAYIVL ATIVLKANRN TLFKVFAAFG AIGWVVYAAK
LAILKQGVLL G
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