Gene Spea_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3123 
Symbol 
ID5663512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3826590 
End bp3827378 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content44% 
IMG OID641237763 
Producthypothetical protein 
Protein accessionYP_001502974 
Protein GI157962940 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.292454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATT TAACGCAAAA CGAATCAATA CAACTTCCTG ACACGGCTTT TGAAATTGCC 
GAGCACTTGG GCTTTTCTAA GCAAAAGAAT GCAAACTGGG CCTGGCTAGA ATTAGCAGGC
TCTGTGTTGA GCTTTTATGT CGTTGATAGG CATGAACGTT TAAACGGACT GCTTAAGTGG
TTCTATAACG ATTTAGGCTT TTGTGCTCGT GAAGCATACT ACAGCGCTGA GGCGGCTGAT
TTAGGCAAAT GCCTAACATC GAAGCAAGGC AATAGTACAA CATTGGCAAC GGTGTTGATG
TTATTGGCTA AGCAACTCGA CTTAACACTT GATTTGCTGC TATTACCTGG ACAAACAGTA
CTTTGTAGCC GAATCGACGA TGAAGTGCGT TATATAGACC CATTAACAGG GGCGCAGCTG
ACTAAGCACC AACTGCATGT CTTCGTGCGT GGTGAACTAG GCAATAGTGC TAAGTTCAAG
CCAAGCTACT TAAAGCCAGC TAGCATCAAG CGTATCATTT CTCGAATGCT GCATGAGATG
AAAGCGGGCA GCATTGTTGC GCATAACTTC GAGCCTGCGA TGGAGTGCTG TAACTTGTTA
CTACAATGGC ATCAGGATGA TCTAAATCTC AATCGTGAGC GCGCCTTTAT TGCCCAGCAG
TTAGGTTGTA TTAGCGTTGC TACCGCCGAT TTAACTCATT TTGTGGAAAA CAGTCCACAT
GATCCAGTTA TTGAGCTGGT GAAGATGCAA TTGAAAGAAC TTAAAGAGGA AGTGGAAACT
TTCCATTAA
 
Protein sequence
MTDLTQNESI QLPDTAFEIA EHLGFSKQKN ANWAWLELAG SVLSFYVVDR HERLNGLLKW 
FYNDLGFCAR EAYYSAEAAD LGKCLTSKQG NSTTLATVLM LLAKQLDLTL DLLLLPGQTV
LCSRIDDEVR YIDPLTGAQL TKHQLHVFVR GELGNSAKFK PSYLKPASIK RIISRMLHEM
KAGSIVAHNF EPAMECCNLL LQWHQDDLNL NRERAFIAQQ LGCISVATAD LTHFVENSPH
DPVIELVKMQ LKELKEEVET FH