Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3123 |
Symbol | |
ID | 5663512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3826590 |
End bp | 3827378 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641237763 |
Product | hypothetical protein |
Protein accession | YP_001502974 |
Protein GI | 157962940 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.292454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATT TAACGCAAAA CGAATCAATA CAACTTCCTG ACACGGCTTT TGAAATTGCC GAGCACTTGG GCTTTTCTAA GCAAAAGAAT GCAAACTGGG CCTGGCTAGA ATTAGCAGGC TCTGTGTTGA GCTTTTATGT CGTTGATAGG CATGAACGTT TAAACGGACT GCTTAAGTGG TTCTATAACG ATTTAGGCTT TTGTGCTCGT GAAGCATACT ACAGCGCTGA GGCGGCTGAT TTAGGCAAAT GCCTAACATC GAAGCAAGGC AATAGTACAA CATTGGCAAC GGTGTTGATG TTATTGGCTA AGCAACTCGA CTTAACACTT GATTTGCTGC TATTACCTGG ACAAACAGTA CTTTGTAGCC GAATCGACGA TGAAGTGCGT TATATAGACC CATTAACAGG GGCGCAGCTG ACTAAGCACC AACTGCATGT CTTCGTGCGT GGTGAACTAG GCAATAGTGC TAAGTTCAAG CCAAGCTACT TAAAGCCAGC TAGCATCAAG CGTATCATTT CTCGAATGCT GCATGAGATG AAAGCGGGCA GCATTGTTGC GCATAACTTC GAGCCTGCGA TGGAGTGCTG TAACTTGTTA CTACAATGGC ATCAGGATGA TCTAAATCTC AATCGTGAGC GCGCCTTTAT TGCCCAGCAG TTAGGTTGTA TTAGCGTTGC TACCGCCGAT TTAACTCATT TTGTGGAAAA CAGTCCACAT GATCCAGTTA TTGAGCTGGT GAAGATGCAA TTGAAAGAAC TTAAAGAGGA AGTGGAAACT TTCCATTAA
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Protein sequence | MTDLTQNESI QLPDTAFEIA EHLGFSKQKN ANWAWLELAG SVLSFYVVDR HERLNGLLKW FYNDLGFCAR EAYYSAEAAD LGKCLTSKQG NSTTLATVLM LLAKQLDLTL DLLLLPGQTV LCSRIDDEVR YIDPLTGAQL TKHQLHVFVR GELGNSAKFK PSYLKPASIK RIISRMLHEM KAGSIVAHNF EPAMECCNLL LQWHQDDLNL NRERAFIAQQ LGCISVATAD LTHFVENSPH DPVIELVKMQ LKELKEEVET FH
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