| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3117 |
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| Symbol | |
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| ID | 5663506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3818940 |
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| End bp | 3820439 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237757 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001502968 |
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| Protein GI | 157962934 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGAG AGCAATGGAA TTCTAGGACA GGCTTTATTC TAGCGGCAGT TGGCTCGGCA
ATCGGCCTCG GCAATATTTG GCGCTTTCCC TATATGGCAT ATGAGAATGG AGGTGGTGCG
TTTTTCATTC CTTATCTATT TGCCATGCTC ACAGCAGGCA TTCCATTTAT GATCATGGAA
TTCAGTCTGG GCCATAAGTA CCGCGGCGCA GCGCCAAAGA TCTTCGCACA GCTCGGTAAA
TCACTTGGTT TTCGGCTGGA GTGGCTAGGC TGGTTTCAAG TGTTTATCGC CGCGGTCATT
GCTATCTATT ATGTCGCGAT CATCGGCTGG GCCATCTCCT ACTTTGTTTT CTCTATATCC
CAGAGCTGGG GCACTGATAC CAATGCCTTC TTCTTCAATG AATACCTACA ACTAGGCGAC
AACTCGCCCA CTAAGCTAGG CTCCATGCAA TTCCATATTG CTATCCCCAT GGCAATAGCT
TGGAGTGTTA CAACCCTTGC GGTATACAGT GGCGTAAAAG GCGGTATCGA GCGCGCCGGT
AAAATCATGA TGCCACTACT TTTCATCATG GTGCTGCTAT TTATTGCCAG AATTGTGTTT
CTCCCTGGCG CCTTAGAAGG ACTCAACTAC CTATTCAGGC CAGATTTCAG CATGATTTTA
AATGCTAAAG TTTGGTCGGC GGCATACGGC CAGATTTTTT TCACCTTAAG TGTCGGCTTT
GCCATCATGC TCGCTTACTC TAGCTACCTA CCAGAGAAAT CCGATATCAA TAACAATGCC
ATTATGACGG TATTAATTAA CTGTGGCTTC TCTATCTTAG GCGGTATTAT GATCTTTTCC
GTACTAGGCT ACATGGCCCA GGAGCAAGCC AAGCCCATTA CCGACGTGGT CACGTCGGGT
GTAGGTCTGG CTTTTGTCAC TATACCCGCG GCGATTAATT TGCTGCCAGC CCCCTATATC
TTCGGGCCGC TATTCTTCTT GGCTTTAGTG GTTGCCGGGA TCAGCTCACA TATCTCCATT
ATTGAAGCAG TGGTCTCAGC GGTAATCGAT AAACTGTCAA TCTCACGAAA AAAGGCGGCG
CTGCTGGTTT GTGGTACGGG CTTTGTTATC TCTATGGCGT TTTCGAGTAA CGGCGGGCTA
TTACTACTCG ATCTCGTCGA TTACTTTATC AATAACATCG CCCTACTCTC TAGTTGCCTA
ATCGAGCTGA TTATCCTCGC CTGGTTATTT AAGATTGCCG ATATCCGTGA CTATGCCAAC
CGCTGCAGTG AATTTAGTAT CGGCAAGTGG ATGGAGATCT GCCTACGCTT TATCGGCCCT
ATCATGCTCG CGATTATTCT AGTTAAAAAT CTCATCAACA CGTTGACCGA CGGCTATGGC
GACTACCCGA TTGCAGATCA GCTATTTCTC GGCTGGGGAC TGGTGGCGAG TATGCTGTTT
GCCGCCATCT TTATCAGTGT CATCTCAGGT AATAATATTT CGAAGGAACC AAAGCTATGA
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| Protein sequence | MQREQWNSRT GFILAAVGSA IGLGNIWRFP YMAYENGGGA FFIPYLFAML TAGIPFMIME
FSLGHKYRGA APKIFAQLGK SLGFRLEWLG WFQVFIAAVI AIYYVAIIGW AISYFVFSIS
QSWGTDTNAF FFNEYLQLGD NSPTKLGSMQ FHIAIPMAIA WSVTTLAVYS GVKGGIERAG
KIMMPLLFIM VLLFIARIVF LPGALEGLNY LFRPDFSMIL NAKVWSAAYG QIFFTLSVGF
AIMLAYSSYL PEKSDINNNA IMTVLINCGF SILGGIMIFS VLGYMAQEQA KPITDVVTSG
VGLAFVTIPA AINLLPAPYI FGPLFFLALV VAGISSHISI IEAVVSAVID KLSISRKKAA
LLVCGTGFVI SMAFSSNGGL LLLDLVDYFI NNIALLSSCL IELIILAWLF KIADIRDYAN
RCSEFSIGKW MEICLRFIGP IMLAIILVKN LINTLTDGYG DYPIADQLFL GWGLVASMLF
AAIFISVISG NNISKEPKL
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