| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3115 |
|---|
| Symbol | |
|---|
| ID | 5663504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3817303 |
|---|
| End bp | 3817731 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641237755 |
|---|
| Product | VanZ family protein |
|---|
| Protein accession | YP_001502966 |
|---|
| Protein GI | 157962932 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5652] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTAT CTACGGGTTT TCTTATGATT GAGTCAAATA ACATAGATGC ATACGACGTG
ATAAACAGAC AAACTATTTT TAAGTGGGCA CTGGCTTTAA TGCTCATTCT GGTAAGTTAC
TTGGTTTTCT CAAAACCCAG TTACCCAATA GGGATCCCTA ATTTCGATAA AATTGGTCAC
GTAGGCAGTT TTTTTGTCTT GTCATACCTA ACCTACTTAG CCTTCAGGCC TAAGTGGTAC
ACGTTGGCGG TTATTTTAGC GGGCTACGCA GTATTTATCG AAGTCGTGCA ATCTCAACTT
TCCTATCGTA GCGCCTCCCT AGCCGATTTC ATTGCCGATA TGGTGGGGAT CTCCCTATTT
TATTTTACTC ATTGGCTTTA TTGTCGCTAC TTTAAAACCG CTAAGCTCAC CGATCCTGAT
CTGCAGTAA
|
|---|
| Protein sequence | MTLSTGFLMI ESNNIDAYDV INRQTIFKWA LALMLILVSY LVFSKPSYPI GIPNFDKIGH
VGSFFVLSYL TYLAFRPKWY TLAVILAGYA VFIEVVQSQL SYRSASLADF IADMVGISLF
YFTHWLYCRY FKTAKLTDPD LQ
|
|---|
| |