Gene Spea_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3111 
Symbol 
ID5663500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3813481 
End bp3814140 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID641237751 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001502962 
Protein GI157962928 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTT GGAAAACTTG GATAACTTAT TTAACAAAAA GTTTAACGAA AAATTTAGCA 
AAAAAAACAA CTAAGATAGC CAAGACGCTC GCGTCACTGG TCCTGTTAAC AACGAGCCAG
CTCAGCTATG CCGTAGATAT TCAGCCCAAC ACGCTTTACC CTCTCGTTGA GCTAGACACC
AGCATGGGCA AGATAGTGGT GGAGTTAGAT AGAACTCGCT CGCCGATCAC AGTTGATAAC
TTTCTAACCT ATGTTGTAAA AGGTCACTAT GACAACACAC TATTTCACCG TGTGATTAGC
GATTTCGTGG TGCAAGGTGG CGGTTTAGAC TTAAACAAAG AAGAGCGACC GACCGATAAA
CCTATCGTCA ATGAATCGGG AAACGGCCTC TCTAACCTAA CTGGCACCAT TGCCATGGCT
CGAGAAGCCG AGCCACATAC CGCCACCAGC CAGTTCTACT TTAATGTAGT CGATAATGAG
AAGTTAGATC CCTCTTCGCG CCGCTGGGGC TATACGGTTT TTGGTGAGGT AACCTCAGGC
ATGGAAGTAT TGCAAGCCAT ATCGTTAGTG CCTACTGATT TCAATAGCCA AGTAGAGTGG
CCTGACTTTC CAGTGCAAGA TATTGTTCTT AAAAAGGCGA CCTTGCTACC TCGAAATTAA
 
Protein sequence
MKTWKTWITY LTKSLTKNLA KKTTKIAKTL ASLVLLTTSQ LSYAVDIQPN TLYPLVELDT 
SMGKIVVELD RTRSPITVDN FLTYVVKGHY DNTLFHRVIS DFVVQGGGLD LNKEERPTDK
PIVNESGNGL SNLTGTIAMA REAEPHTATS QFYFNVVDNE KLDPSSRRWG YTVFGEVTSG
MEVLQAISLV PTDFNSQVEW PDFPVQDIVL KKATLLPRN