Gene Spea_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3110 
Symbol 
ID5663499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3812826 
End bp3813431 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content45% 
IMG OID641237750 
Producthypothetical protein 
Protein accessionYP_001502961 
Protein GI157962927 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3056] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGGC ATCTCAATTT TTTGCTAATT AATATAATAA TGAAATCTTT ACTTTTAGTC 
GTTGCAGCCG CGGTATCAAT GGTAGGCTGC GCTAGCCAAG GTCCATCTCA TATTGCATTA 
AACCCTGAAG TGCCATCAAT TATTCAGCAA ACAGAAGTAG AACTTCCTGT TGCCCTAGAA 
ACGATTGATA CCCGCTCAGC AAACTTTATC GTACGCTTTA ATGACGGCGA TAAAGCAGCA 
CGCCTTGTCA GCCCAACTGA AGCGCCTCGC GTTCAAATGG ACCAAGTATT TAGGGATGGC 
TTTACTCAGG CGGGATATCG CATCGATCCA AGCTCGGTAA ATCACATGCA GTTCCAGCTA 
GAGCAGCTAT TAACCGATGT CGACGAAGGC ACATTTGGCT TCGAAGCCAA TAGTCAGATT 
ATCATCAATG TTATTGCTAA AAACGCCAAG CAAGAGCTCA CAAAACGCTA TCGCGCCAAG 
GGACTATTAA AGGGTCCGTT TAGCGCCGAT TTTGCTACAC TAGAGCTTGA AATGAACAAG 
CTACTCGGTG AGCTAACCCG CGACATCATT AACGACCCAG AGCTGAATCA ATTCATTCAG 
CAGTAA
 
Protein sequence
MLRHLNFLLI NIIMKSLLLV VAAAVSMVGC ASQGPSHIAL NPEVPSIIQQ TEVELPVALE 
TIDTRSANFI VRFNDGDKAA RLVSPTEAPR VQMDQVFRDG FTQAGYRIDP SSVNHMQFQL 
EQLLTDVDEG TFGFEANSQI IINVIAKNAK QELTKRYRAK GLLKGPFSAD FATLELEMNK 
LLGELTRDII NDPELNQFIQ Q