Gene Spea_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3106 
Symbol 
ID5663495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3808223 
End bp3808930 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content46% 
IMG OID641237746 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001502957 
Protein GI157962923 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAG AGGATTTTGA TGAGCTGGCT CCAGTAAAAA CGGGTCAATC TGTAGGGGAG 
GGCAATGCTA AAGCTGACTC TAGGTTTGAG CTTAAGCCCC CATCTAATAT CCCTATGGAG 
CAAGACAAAC CGCCCTTTAC CTTAATTAAA GCCTATCTTA ATCTGCAGCA GCAACAAGCA 
TTATTCAATG AGTCGGCGAA TTACCCATTC ACTCGACCAG AGGTGTTGTT ATACGGCAAA 
AGTCATCCCA TTCCCCGTAA CCAAGTGTGG TTTGCCGATC AAGGCTGTGA CTACCGCTAT 
TCCGGTTTAC TTGTTCAGGC ATTAGCTTGG CCCAAGTACG CGTCTAAACT GAGGCAAAAG 
CTCGCCAGAG ATTTCGGGCT AAATAGTAAT GGTGTCTTGG TCAATCGGTA TGCCGACGGA 
CATGAGTCCA TGGGCTGGCA CAGTGATGAT GAACCAGAGA TTGAGCCTGC TAGCGATATC 
GCGTCGCTGA CGCTTGGAGC GACGCGAGAC TTTTTTATCC GTCATAAGCA ATCTCAGCAA 
AAAATTTGTT TACAGCTACA AAGTGGTGAT TTGCTTATTA TGCATTGGCC GATGCAAAAG 
GATTGGGAGC ATTCTTTGCC GAAACGTCTT AAGGAGAAAG ATGTTCGGAT CAATTACACC 
TATAGGCGCT TAATTGTTGG GTTTCACCTG CCTGAGGTGG CTAAATAA
 
Protein sequence
MKQEDFDELA PVKTGQSVGE GNAKADSRFE LKPPSNIPME QDKPPFTLIK AYLNLQQQQA 
LFNESANYPF TRPEVLLYGK SHPIPRNQVW FADQGCDYRY SGLLVQALAW PKYASKLRQK 
LARDFGLNSN GVLVNRYADG HESMGWHSDD EPEIEPASDI ASLTLGATRD FFIRHKQSQQ 
KICLQLQSGD LLIMHWPMQK DWEHSLPKRL KEKDVRINYT YRRLIVGFHL PEVAK