Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3078 |
Symbol | |
ID | 5663468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3775838 |
End bp | 3776638 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641237719 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001502930 |
Protein GI | 157962896 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000470092 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAA TACTATTACT GCTGAGCGCC GCGTTGTTTT TAACGGGCTG CGCAACCACG CAATCGCCTA CTGGCCGCGG GCAAACCTTG CTGTTTTCGC AGCAAGAGAT GACACAGCTC GGTGATACCT CTTTTGCACA AATAAAGCAG CAAGAGAAAG CTAGCCAAGA TAGGGCGCTT AACGCATATG TTAGCTGTGT TGCCAATAGG ATTACTCAAG CCTTGCCGGA TCAAAGCTTA CCTTGGGAAG TGGTGGTGTT TGACTCTGAG CAAGTAAACG CCTTTGCACT GCCTGGAGGG CACATAGGTG TATACACTGG ATTGCTGAAT GTGGCCGTTA ATTCCGACCA ACTAGCCACC GTTATCGGTC ATGAAGTGGC GCATGTACTC GCCAACCACA GCAATGAGCA GGTGTCGCGT GCACAGATGA CTGGCGCAGG CATGCAGCTT GCTGACCTAG CCTTAGGCGC AGGTGGCATT GCCGATAAAG AACTTTATAT GGCTGCACTC GGTTTAGGTG TGCAGGTGGG CTACATCTTA CCTTATGGCC GCAGCCAAGA GTCAGAGGCC GATGTGATAG GCGTTGAGCT GATGGCAAAA GCTGGCTTTG ATCCAGCCGC GAGCGTTGAG CTTTGGAAAA ATATGTCAAA GGTCGGTGGT GAACAGGGGC CAGAGTTGCT ATCGACTCAC CCATCACATG ACCAACGCAT TGCACAATTG CAGCAAATGC AGGCAAAAGC GCAGCCTTTA TATCAAGCCA ATAAATCCAG CGTGAAAAAT ACTTGCCAAA GACCAAAATA G
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Protein sequence | MKGILLLLSA ALFLTGCATT QSPTGRGQTL LFSQQEMTQL GDTSFAQIKQ QEKASQDRAL NAYVSCVANR ITQALPDQSL PWEVVVFDSE QVNAFALPGG HIGVYTGLLN VAVNSDQLAT VIGHEVAHVL ANHSNEQVSR AQMTGAGMQL ADLALGAGGI ADKELYMAAL GLGVQVGYIL PYGRSQESEA DVIGVELMAK AGFDPAASVE LWKNMSKVGG EQGPELLSTH PSHDQRIAQL QQMQAKAQPL YQANKSSVKN TCQRPK
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