| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3070 |
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| Symbol | |
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| ID | 5663460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3765146 |
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| End bp | 3766054 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237711 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001502922 |
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| Protein GI | 157962888 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0587358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTTA TTAATATGAG TAACTTAAGC AAGTTAACCA AAGCACGTTA CCTATCGAGT
GTGTTCTCGC TACTGATCAT GCTTGCTTCA ATTGGCATCA TCTTGACTAA TGGTTTTAAT
TTAGGACTGG ACTTTACCGG CGGTGTGGTA ACTGAAGTTA AACTCGATCC GAATATTAAA
GCCGCTCAAA TAAGTGAGTT ATTAGGTAAA GATTCACAGC AAGAGGTGAG TGTAATCTCT
GCGGGTGAGC CGGGCCGATG GGTGCTGCGT TACGCAAAGG TCGATGATGT ATCAGGAGCA
GATATACGTA CAGTACTTGC ACCATTAACA AATCAAGTCG AAGTTCTTAA CTCGAGTATT
GTCGGGCCAC AGATAGGCCA AGAGTTAGCT GAGCAAGGAG GTTTGGCGCT ATTAGCCGCT
ATGCTATGTA TCCTAGGCTA CCTAAGTTTT CGTTTTGAGT GGCGACTCGC TAGCGGTGCA
CTGCTGGCCT TGTTTCATGA TGTCATCTTT GTACTGGCAT TTTTCTCGCT GACTCAAATG
GAATTTAACT TAACGATTCT CGCCGCTGTA TTGGCCATCT TAGGTTACTC CTTAAATGAT
TCTATCGTAA TTGCCGACAG GGTTAGGGAA GTGCTTATTG CTAAGCCTAA GGCGGCGATA
GATGAAATTT GCAGTAGTGC AGTACAAGCC ACCTTTTCGC GAACTATGGT TACCAGTGGT
ACAACCTTGT TCACAGTAGC TGCACTGTGG ATTATGGGGG GGGCACCGCT GCAAGGATTT
TCGATTGCCA TGTTCTTAGG AATATTAATC GGTACTATCT CGTCAGTGTC GGTAGGAACC
TGTTTACCCG AGTACTTAAA AGTGAGTGCG GAGCATTACA AGGTTGAACC GATTAGCGAC
GCTCCATAA
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| Protein sequence | MEFINMSNLS KLTKARYLSS VFSLLIMLAS IGIILTNGFN LGLDFTGGVV TEVKLDPNIK
AAQISELLGK DSQQEVSVIS AGEPGRWVLR YAKVDDVSGA DIRTVLAPLT NQVEVLNSSI
VGPQIGQELA EQGGLALLAA MLCILGYLSF RFEWRLASGA LLALFHDVIF VLAFFSLTQM
EFNLTILAAV LAILGYSLND SIVIADRVRE VLIAKPKAAI DEICSSAVQA TFSRTMVTSG
TTLFTVAALW IMGGAPLQGF SIAMFLGILI GTISSVSVGT CLPEYLKVSA EHYKVEPISD
AP
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