| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3068 |
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| Symbol | rrmJ |
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| ID | 5663458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3764031 |
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| End bp | 3764660 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237709 |
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| Product | 23S rRNA methyltransferase J |
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| Protein accession | YP_001502920 |
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| Protein GI | 157962886 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000567289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGGAA AAAAACGAAC GGCCAGTTCT TCTCGCTGGA TGCAGGAACA TTTCGACGAT
CACTATGTCA AACTGTCGCA AAAGCGCGGT TTAAGGTCGC GTGCGGCCTT TAAGATTGAA
GAGATCCAAG AAAAAGATAA ACTCATTCGT CCGGGAATGA CTGTTGTCGA TTTAGGTGCC
GCGCCGGGTG GCTGGTCTCA AATTGCCGTT AAGTTGGCAG GAGACAAGGG TAAAGTTATC
GCTTGTGATA TTTTACCTAT GGACCCGATT GTTGGTGTTG ATTTCCTACA GGGCGATTTC
CGCGAAGAGA AAGTACTGGA CGCATTGTTA ACCCGAGTGG GTGATGCCAA GGTCGATGTG
GTGCTGTCAG ATATGGCACC TAATATGAGT GGAACAGGTG GTGTTGATCA GCCTCGAGCC
ATGTATTTAG TAGAACTAGC CTTAGATATG TGTCATCAAG TTTTGGCACC TAATGGCAGT
TTTGCGGTTA AAGTCTTTCA GGGGGAGGGC TTTGATGAAT ACATGAAAGC GGTTAAAGAG
GCGTTCAAAA CCGTTAAAAC ACGTAAGCCC GATTCTTCAC GGCCGCGATC GCGTGAAGTC
TATCTTGTGG CGACGGGCTA CAAGTTATAG
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| Protein sequence | MSGKKRTASS SRWMQEHFDD HYVKLSQKRG LRSRAAFKIE EIQEKDKLIR PGMTVVDLGA
APGGWSQIAV KLAGDKGKVI ACDILPMDPI VGVDFLQGDF REEKVLDALL TRVGDAKVDV
VLSDMAPNMS GTGGVDQPRA MYLVELALDM CHQVLAPNGS FAVKVFQGEG FDEYMKAVKE
AFKTVKTRKP DSSRPRSREV YLVATGYKL
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