| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3061 |
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| Symbol | nusA |
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| ID | 5663451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3755843 |
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| End bp | 3757342 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237700 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001502913 |
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| Protein GI | 157962879 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000291489 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAG AGATTCTGCT AGTCGCTGAG GCGGTTTCAA ATGAGAAAGG TGTACCGCGC
GAAAAGATTT TTGAAGCGCT GGAAATTGCA CTAGCCACAG CAACCAAGAA AAAATACGAA
GGTGACATCG AAGTTCGTGT CGCAATCGAC CGTAAGACTG GTGCATACGA AACTTTCCGT
CGTTGGATGG TAGTTGAAGA TGCTGGCGTA CCATTGGAAA ACCCATTCCG TGAAATTACG
CTTGAAGCTG CTAAATATGA CGATCCAGAA ATTGAGTTGG GTGGTTACAT CGAAGATGAA
ATCGAGTCGG TTGCATTCGA CCGTATTACT ACTCAAACAG CTAAGCAAGT TATCGTACAA
AAAGTACGTG AAGCTGAGCG TGCTCAAATT GTAGATCAGT TCCGCGACCG CGAAGGTGAG
TTGATTGTTG GCGTAGTCAA GAAGAGCAAC CGCGAGAGCG TTGTTGTTGA TCTTGGTACT
AACGCAGACG GCGTACTGTT CAAAGAAGAT TTAATTTCAC GTGAATCGTT CCGTCCAGGC
GACCGTGTTC GTGCATTGCT TTATTCGGTA CGTCCAGAAG CTCGCGGCGC ACAGTTATTC
TTGACTCGTA CTAAACCAGA TATGCTTATT GAGCTATTCC GTGTTGAAGT ACCAGAAATT
CAAGATGAGA TGATCGAAAT CATGGGCGCT GCTCGTGATC CAGGTTCTCG CGCTAAGATT
GCGGTTAAGT CTAACGACCG TCGCATCGAT CCTATCGGTG CATGTGTTGG TATGCGTGGC
GCACGTGTTC AAGCTGTCTC TAACGAGCTT GGCGGTGAGC GTGTTGATAT CGTGCTTTGG
GATGATAACC CAGCGCAATA CGTTATTAAC TGTATGGCAC CAGCTGATGT GGCATCTATC
ATCGTTGATG AAGACAACCA CTCAATGGAT ATCGCCGTTG AAGCAGACAG CTTAGCGCAA
GCGATTGGCC GTAACGGTCA AAATATTCGT CTAGCAACTC AACTATCTGG TTGGGAGCTA
AACGTGATGA CAGTAGCTGA CATGAAAGCT AAGCATCAAG CTGAAAGCGC TAAGGTAGTG
AACTTGTTCA TTCAAGCGCT CGACGTTGAT GAAGAGTTTG CACAACTACT TTCTGATGAA
GGTTTCACGT CTCTAGAAGA GATTGCCTAC GTACCAGCAT CAGAATTACT AGAAATTGAT
GGATTCGACG AAGATATCGT TGAATCATTA AGAGAGCGCG CAAAAGCGGC GATCTCTACT
CGTGCTCTTG CGACTGAAGA GGCACTAGAT GGTGCTGAAC CAAGTGAAGA TCTTCTTGCG
TTAGAAGGTT TGGATAGACA CTTGGCATTC GTAATGGCAA GCAAAGGCGT AATTACGCTT
GAAGATTTAG CCGAACAAGG CATTGATGAT TTGATCGAAA TTGAAGAATT GACAGAAGAA
AAAGCAGGTG AGCTTATTAT GGCTGCCCGT AATATCTGTT GGTTTGGCGA AGAAGCATAA
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| Protein sequence | MNKEILLVAE AVSNEKGVPR EKIFEALEIA LATATKKKYE GDIEVRVAID RKTGAYETFR
RWMVVEDAGV PLENPFREIT LEAAKYDDPE IELGGYIEDE IESVAFDRIT TQTAKQVIVQ
KVREAERAQI VDQFRDREGE LIVGVVKKSN RESVVVDLGT NADGVLFKED LISRESFRPG
DRVRALLYSV RPEARGAQLF LTRTKPDMLI ELFRVEVPEI QDEMIEIMGA ARDPGSRAKI
AVKSNDRRID PIGACVGMRG ARVQAVSNEL GGERVDIVLW DDNPAQYVIN CMAPADVASI
IVDEDNHSMD IAVEADSLAQ AIGRNGQNIR LATQLSGWEL NVMTVADMKA KHQAESAKVV
NLFIQALDVD EEFAQLLSDE GFTSLEEIAY VPASELLEID GFDEDIVESL RERAKAAIST
RALATEEALD GAEPSEDLLA LEGLDRHLAF VMASKGVITL EDLAEQGIDD LIEIEELTEE
KAGELIMAAR NICWFGEEA
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