| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3058 |
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| Symbol | truB |
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| ID | 5663448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3751683 |
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| End bp | 3752630 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237697 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001502910 |
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| Protein GI | 157962876 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.538597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTC GTTCTCGCGG TCGTTTTATC GACGGTATTG TACTGTTAGA TAAAGACACT
GGCATGAGCT CTAACTTTGC ATTACAAAGA GTGAAACGCT TCTTTAATGC AAATAAAGCG
GGTCATACCG GTGCACTGGA TCCGCTAGCA ACGGGCATGT TACCTATTTG CTTAGGTGAG
GCGACTAAGT TTTCGCAGCA CTTACTCGAC GCGGACAAAC GCTACTTAGT AACGGCAAAG
CTTGGACAAC GTACTGATAC AAGTGACTCT GATGGTGAAA TTGTTCAAAC GAGAGAAGTT
AACTTCACTC AAGAGCAGTT AGATACTGCG CTGGAATATT TTCGCGGTGA GACGATGCAA
GTCCCGTCAA TGTATTCAGC ACTAAAGTAC CAAGGTCAGC CTTTGTATAA GTACGCTCGT
GAGGGAATTG AAGTTCCTCG TGAGGCACGC CCTATCAATG TGTTTGAGTT GAACTTTATT
AGCCTTGAAG GTGATGAGTT AACCTTAGAC ATTCATTGTT CTAAAGGTAC CTATATCCGT
ACTATCACAG ATGATTTAGG CGAGATGTTA GGCTGTGGCG CACACGTTAT CATGCTACGT
CGCACACAAG TTGCTGGCTA CCCCTATGAT AAAATGGTGT CATTGAAACA ACTTGAAGAG
TTAGTGGCTA AGGCTGATGC CGAGTCCTTG ACTCTATCTG AGGTATTGGA CCCATTACTG
TTACCTATGG ATACTGCGGT AAGTGGTTTC AAAGAGATAA ATGTCTCTGA TGAACTTGCT
ACTTACCTGA TGAATGGTAA CCCTGTGCAG GTGGCTAATT TGCCTGTCGA TGAGTTAGTG
CGTATCACGA TTGGCGATGC TCGTCAGTTT GTTGGTATCG GACAAATGAA CGATGATGGT
CTGCTTGCTC CCAAGCGACT CATCGTATTA AGAGAGCCAC AAGACTAA
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| Protein sequence | MARRSRGRFI DGIVLLDKDT GMSSNFALQR VKRFFNANKA GHTGALDPLA TGMLPICLGE
ATKFSQHLLD ADKRYLVTAK LGQRTDTSDS DGEIVQTREV NFTQEQLDTA LEYFRGETMQ
VPSMYSALKY QGQPLYKYAR EGIEVPREAR PINVFELNFI SLEGDELTLD IHCSKGTYIR
TITDDLGEML GCGAHVIMLR RTQVAGYPYD KMVSLKQLEE LVAKADAESL TLSEVLDPLL
LPMDTAVSGF KEINVSDELA TYLMNGNPVQ VANLPVDELV RITIGDARQF VGIGQMNDDG
LLAPKRLIVL REPQD
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