Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3055 |
Symbol | |
ID | 5663445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3746741 |
End bp | 3748855 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237694 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001502907 |
Protein GI | 157962873 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000445882 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCACG TGAATCCAAT CGTAAAGAGT TTTCAATATG GTCAGCACAC AGTCACATTA GAGACTGGGG TTATTGCACG TCAAGCAGAT GCAGCTGTTT TGGCAAGTAT GGGTGATACA ACAGTATTGG TTACTGTTGT TGGCAAGAAG TTTGAAGAGC CAGGCCGTGA CTTTTTCCCG CTAACCGTTA ATTACCAGGA AAAAACATAC GCAGCAGGTA AGATCCCTGG TGGATTCTTT AAGCGTGAAG GTCGTCCATC TGAAGGCGAA ACGCTTACAG CTCGTCTAAT TGACCGTCCA ATCCGTCCAC TATTCCCGAA TGGTTTCAAG AACGAAGTTC AGGTTATCAT TACAGTAGTT TCTGTTGATC CAGAAATCAG CCCAGAAGTT ATCTCTATGA TCGGTACTTC AGCTGCACTT TCTATCTCTG GTATTCCATT TAATGGTCCA CTAGGTTCAG CGCGTGTTGG TTATGTTAAT GGTGAATATA TCCTTAACCC AACAGTTTCT CAGCTAGTTG ATAGCCAGCT AGAGCTTTCT GTTGCTGGTA CTGAAAGTGC AGTACTAATG GTTGAATCAG AAGCAAGCGC ACTACCTGAA GAAGTGATGT TAGGTGCGGT TGTTTATGGT CACGATCAGC AGCAAGTGGT TATTCAAGCA ATTAAAGAGC TACAAGCTGA AGTTAACAAG CCTGTATGGG ATTGGTCTGC ACCTGCGCAA GACGAAACGC TTGTTGCTAA GATCAAAGAT TTGGCTGAAG CAGGTCTTAC TGAAGCTTAC CAAATTGAAG TTAAGCAAGA TCGTTACGCT CAAGTTGGTG TAGTTAAGAA TGCTGCTAAA GAAGCATTAT TGGCTGAAAA CCCAGATGCT AACACACGTG AAATCGACGG TCTTCTAGGT AGCCTAGAGA AGAAAGTGGT TCGTGGCCGT ATTATCTCTG GTCAGCCACG TATCGATGGT CGTGAGCCAG ATATGGTTCG TGCACTTAAC GTTATGGCTG GTGTACTTCC ACGTACTCAC GGTAGCTCAC TGTTCACTCG TGGTGAAACT CAGGCGCTAG TAACTTGTAC TCTTGGTACA GAGCGTGATG CACAGAAGAT TGATAGCATC ATGGGCGAGT ACACTAACCG CTTTATGCTT CACTACAACT TCCCTCCATA CTCTGTTGGT GAAACAGGCA TGGTTGGTTC TCCTAAGCGT CGTGAAATTG GTCACGGTAA GCTAGCATGG CGTGGTATTA ACGCGGTTAT GCCTACTGCT GAAGAGTTCC CATACAGCGT TCGTATCGTA TCTGAAATCA CTGAATCTAA CGGTTCAAGC TCTATGGCGT CAGTTTGTGG TACTTCTCTT GCTCTTATGG ATGCAGGTGT ACCAATCAAG ACTTCTGTTG CGGGTATCGC GATGGGTCTA GTTAAAGAAG GCGACGATTT CGTTGTTCTT TCTGACATCC TAGGCGATGA AGATCACCTT GGTGACATGG ACTTTAAAGT TGCGGGTACT CGCGACGGTA TTACTGCTCT GCAGATGGAT ATCAAGATCG AAGGTATCAC TAAAGAGATC ATGCAGATTG CTCTTAAGCA AGCATACGGC GCTCGTGTTC ATATCCTAGA CGTAATGGAT AGGGCTATCT CTGGCCACCG TGGTGATATT TCTGAGCATG CTCCACGTAT CACAACTATC AAGATCAACC CTGAGAAGAT CCGTGATGTT ATTGGTAAAG GTGGTGCAAC AATTCGTGCA CTTACTGAAG AAACCGGTAC GACTATCGAA CTTGATGACG ACGGTACAGT GAAGATTGCT TCTTCAAATG GCGAAGCGAC TAAAGAAGCT ATCCGTCGTA TCGAAGAGAT CACTGCAGAA GTTGAAGTCG GTACTGTATA CAACGGTAAA GTTGTTCGTA TCGTAGATTT TGGTGCATTC GTAACAATTC TTCCTGGTAA AGATGGTCTA GTACACATTT CTCAAATCGC TGAAGAGCGT GTTGCGAACG TGTCTGACTA CTTAGAAGTA GGTCAAGAAG TTAAAGTTAA AGTGATGGAA GTTGACCGTC AAGGCCGTGT ACGTCTTTCT ATGAAAGAAG CTGCACCTAA AGCCGAAGCG CCAGCTGCTG AATAA
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Protein sequence | MVHVNPIVKS FQYGQHTVTL ETGVIARQAD AAVLASMGDT TVLVTVVGKK FEEPGRDFFP LTVNYQEKTY AAGKIPGGFF KREGRPSEGE TLTARLIDRP IRPLFPNGFK NEVQVIITVV SVDPEISPEV ISMIGTSAAL SISGIPFNGP LGSARVGYVN GEYILNPTVS QLVDSQLELS VAGTESAVLM VESEASALPE EVMLGAVVYG HDQQQVVIQA IKELQAEVNK PVWDWSAPAQ DETLVAKIKD LAEAGLTEAY QIEVKQDRYA QVGVVKNAAK EALLAENPDA NTREIDGLLG SLEKKVVRGR IISGQPRIDG REPDMVRALN VMAGVLPRTH GSSLFTRGET QALVTCTLGT ERDAQKIDSI MGEYTNRFML HYNFPPYSVG ETGMVGSPKR REIGHGKLAW RGINAVMPTA EEFPYSVRIV SEITESNGSS SMASVCGTSL ALMDAGVPIK TSVAGIAMGL VKEGDDFVVL SDILGDEDHL GDMDFKVAGT RDGITALQMD IKIEGITKEI MQIALKQAYG ARVHILDVMD RAISGHRGDI SEHAPRITTI KINPEKIRDV IGKGGATIRA LTEETGTTIE LDDDGTVKIA SSNGEATKEA IRRIEEITAE VEVGTVYNGK VVRIVDFGAF VTILPGKDGL VHISQIAEER VANVSDYLEV GQEVKVKVME VDRQGRVRLS MKEAAPKAEA PAAE
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