| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3054 |
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| Symbol | |
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| ID | 5663444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3745676 |
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| End bp | 3746569 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237693 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_001502906 |
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| Protein GI | 157962872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000578899 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAA AGATGCGAAC AGCCGTAATT ATGCTTATGG CAAGTGTGAG TATGCTGCTG
ACAGGATGTG TGTCCACTCA GTCCGATAGT GATCAACAAG CGTCGATTAG GGTTGCCCCC
ATTTCGCCTG ATTATAAGTT AGAAATTACC TTAGCAAAGT TAAATGAAAT CCTAGCATCA
GTCGAGTTAA CGCCTGAGCA ACGAGCACGT TTTCATTATG ACCGCGGTGT GATTTACGAC
CGTGTTGGTT TGCGCATTCT GAGTCGAATC GATTTCCATC AGGCGCTAAA GCTGCAGCCT
AATTTAGCCG ATGCCTACAA TTTTCTCGGG ATCTATTACA CTCAGGAAAG TGAGTTTGAA
AGTGCCTATG AAGCATTTGA TGCGGTATTG GAATTGTCCC CTGAATACGA CTATGCCTAT
CTGAACCGCG GAATTTCGCT TTATTATGGT GAGCGCATGG AGCTTGCTGT TTCAGATATG
ACCGCTTTTT ATGACCGTGA GCCGTCAGAT GGTTATAGAG TTCTTTGGCT CTATTTAGCC
GAGCGGGAAG TCGATGAGCA AGCCGCGCTG CTACAGCTGA CGGAAAACCG CAAGAATTTG
CAGGCGAATG CTTGGTCGAC AGCGTTAGTT GATTTCTACT TAGGCCAGAA GAGTAAGGAA
GAGGTATTTA ACCTCGCTAA AGAAGGGCTA AAACACCCTG ATGAGTATGC CGAGCGTCTC
TGTGAAGCAT ATTTCTATAT GGCTAAAATT GCGCAAAAAC GAGGTGATAA CGTTCAGGCG
GCTAATTACT TTAGACTCGC ATTGGCGACT AATATCTATG ACTTCGTTGA ACATAGATAT
GCAAGACTTG AGCTTGCGAG AACCAATGAA GCATTAAGAT TGGCTACGAA TTAA
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| Protein sequence | MNQKMRTAVI MLMASVSMLL TGCVSTQSDS DQQASIRVAP ISPDYKLEIT LAKLNEILAS
VELTPEQRAR FHYDRGVIYD RVGLRILSRI DFHQALKLQP NLADAYNFLG IYYTQESEFE
SAYEAFDAVL ELSPEYDYAY LNRGISLYYG ERMELAVSDM TAFYDREPSD GYRVLWLYLA
EREVDEQAAL LQLTENRKNL QANAWSTALV DFYLGQKSKE EVFNLAKEGL KHPDEYAERL
CEAYFYMAKI AQKRGDNVQA ANYFRLALAT NIYDFVEHRY ARLELARTNE ALRLATN
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