| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3051 |
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| Symbol | |
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| ID | 5663441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3742733 |
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| End bp | 3743506 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641237690 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001502903 |
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| Protein GI | 157962869 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000137403 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCCAA TTATCGATAG CCATGCTCAT ATTGATTTTC CTGAGTTTGA TAATGACAGG
GATGCTTTGT TTCTGCAGAT GCGTAGTGTC GGCATCGAAA ATGTGTTGAT CCCTGGTGTT
TCAGCCGATA AATGGCAGAG GCAAATACAG GTTGCTAAGC AATATGACTG TTACTATGCA
CTAGGCGTTC ACCCTTGGTA TAGCGAAAGC GCATCAACAG AGAACATGAG TGATTTAAGG
GGCATACTTA AGCTGCGTAA GGGGGATTGC CGGCTAGTGG CTGTCGGAGA GTGTGGTCTA
GATAAGTTAC ATAAAAGTAA TTTCACAACA CAATTGAACC TTTTCAAGGA GCACATTCAT
ATAGCGATGG AGTTTGATCT GCCTCTAATT ATGCATGTTG TCAAAGCCCA TGAAGAGGTC
ATTAAGTGTC TGAGAACCGA GAGTCCACAC AGAAAAGGTG TCATCCATGG TTTTTATGGT
GGGCCGCAAT TGGCACAACA GTATGTCAAT TTGGGTTACA AGCTAGGCAT AGGTGGCTTG
TTACTTAATG ATAATGCACC GAAGTTACAA CAAACAGTGG CGCAATTGCC ATTAGAGTCA
TTCATTTTAG AAACAGATTC ACCTGCTATG ACTCCCAAAT CCAGTCAAAA TAATCGTAAC
ACTCCATTAA TTCTGCCTGA AATCATCAAA AAAATGGCAA ATTTACAAAA AAAATCAGCC
GTTCGTATTT CAGAACAGAC GTTCTTTAAT GTCTCGCAAC TCTTTGACCT TTAA
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| Protein sequence | MKPIIDSHAH IDFPEFDNDR DALFLQMRSV GIENVLIPGV SADKWQRQIQ VAKQYDCYYA
LGVHPWYSES ASTENMSDLR GILKLRKGDC RLVAVGECGL DKLHKSNFTT QLNLFKEHIH
IAMEFDLPLI MHVVKAHEEV IKCLRTESPH RKGVIHGFYG GPQLAQQYVN LGYKLGIGGL
LLNDNAPKLQ QTVAQLPLES FILETDSPAM TPKSSQNNRN TPLILPEIIK KMANLQKKSA
VRISEQTFFN VSQLFDL
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