| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3045 |
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| Symbol | deoD |
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| ID | 5663435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3735219 |
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| End bp | 3735929 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237684 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_001502897 |
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| Protein GI | 157962863 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.465909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACAC CACACATTAA TGCCGTAGAC GGTGCATTTG GCGATACAGT TCTATTTCCA
GGCGATCCAC TACGTGCAAA GTACATTGCT GAAACTTTCC TAGAGAACGT TGAGCAAGTA
ACTGACGTAC GTAACATGCT AGGTTTTACT GGTACTTACA AAGGCGTTCG TATCTCAGTT
ATGGGTTCAG GCATGGGTAT CCCATCTTGC TCAATCTATG CAACTGAGTT GATCAAAGAT
TACGGTGTTA AGAACCTAAT CCGCGTGGGT ACTTGTGGCG CAATCAGCAC TGACGTTAAA
GTACGTGACG TGATCATCGG TATGGGTGCT TGTACTGATT CACAAACTAA CCGTTTACGC
TTCCGTGGCC AAGACTTCGC AGCTATCTGT GATTACGGTC TACTAAGCGC AGTCGTTAAA
GCTGCTGACG TAAAAGGTAT TAAGTACCGC GTAGGTAACG TTTTCTCTGC TGATCTATTC
TACACGCCAG ATCCAGAAAT GTTTGACGTG ATGGAAAAGA TGGACGTACT AGGTGTCGAA
ATGGAAGCTG CTGGTCTATA CGGCGTAGCA AAAGAGTTCG GTGCTAAGGC GTTATGTGTT
GTAACTGTAT CTGATCATAT CCGTACAGGT GAAAAGACGA CTTCTGATGA GCGTCAAACA
ACATTCAACG AAATGATTGA AATGACACTA GAAGCTGCGA TTACTCTGTA A
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| Protein sequence | MATPHINAVD GAFGDTVLFP GDPLRAKYIA ETFLENVEQV TDVRNMLGFT GTYKGVRISV
MGSGMGIPSC SIYATELIKD YGVKNLIRVG TCGAISTDVK VRDVIIGMGA CTDSQTNRLR
FRGQDFAAIC DYGLLSAVVK AADVKGIKYR VGNVFSADLF YTPDPEMFDV MEKMDVLGVE
MEAAGLYGVA KEFGAKALCV VTVSDHIRTG EKTTSDERQT TFNEMIEMTL EAAITL
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