Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3031 |
Symbol | |
ID | 5663421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3716239 |
End bp | 3716646 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641237670 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001502883 |
Protein GI | 157962849 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAAG TGGATGAAAG AAGGTTATTT TCGCGGTTAA TCTTTGCAAC TGATGCCAAG CTAATCAACC ATGATAGCCA ATTTGATTAT CAACATCAGA ATCACTGGGC AACTAAGCTA CTGGATATCA GCCTTAACGG CGCCTTGGTT GAATTACCCC AAGACTTTGA CTTTAACGGC ACAGAGCTAA CGCTGGAGTT TAGCCTGCAA GAGCCTGAAA TTAGAGTCGT GATGCTAACC AAGCTCGTTC ACAGAGAAAA TCAACAGCTT GGCTTAGCGT CTCAATACAT TGATGTTGAG AGCATTAGCC ACCTGCGCAG GCTTCTAGAA CTAAACTTAG GTGATGCCAG TTTACTCGAC AGAGAGTTAG AGCGGTTATT CGAGCAAAAG AGTCCCAATA TTGAATAG
|
Protein sequence | MDKVDERRLF SRLIFATDAK LINHDSQFDY QHQNHWATKL LDISLNGALV ELPQDFDFNG TELTLEFSLQ EPEIRVVMLT KLVHRENQQL GLASQYIDVE SISHLRRLLE LNLGDASLLD RELERLFEQK SPNIE
|
| |