| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3005 |
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| Symbol | |
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| ID | 5663395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3681586 |
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| End bp | 3682923 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237644 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001502857 |
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| Protein GI | 157962823 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.20592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTG ATGCATTCGA TTTACATCCC AAAATATTAG ATGCAGTTTC TGCCCGCGGT
TACCAGCAGT TGACCCAAGT TCAATCGCAG GTATTACCCG TAGCCATGGA AGGTAAAGAT
ATTATGGCTT GCGCCCAAAC GGGTACAGGT AAAACAGCGG CTTTTGCTCT GCCGCTACTT
AATACTTTGA TTAAGGAATA TAGCCTGTTC ACAGATAGCG AAGCTGAGCT TACGCATCAG
TCAAGTGTTA AGGTGCTAGT CCTTACTCCT ACGCGTGAGC TGGCAATTCA AGTTGCCGAT
AATATCACTG CCTATGCGCA GTTCTTACCG TTTAAGACGA CAGCCGTTTA CGGTGGTTCG
AACATGAACC CACAGCGCAA GGCGTTGCAA GCCGGAGTCG ATATATTAGT CGCGACCCCT
GGTCGGTTGT TCGATCATAT TGGTCAATTT GGTTTGGATT TGTCGAACGT GACACACTTA
GTGGTGGATG AAGCGGATCG CATGCTGGAC TTAGGTTTTG TACGTGATAT CGAAAAAGTG
AAGAAGTTGG TGGCCCCGGC TCATCAAACA CTATTTTTCT CTGCGACCTA CAGTGACGCA
GTTAAAACGC TTGCGGAAAA AATGTTAATT GCGCCAGAGT GGATTAATGT TGCAACCTCT
GCCACAGCTA GCCTTATTAC CCAAGAAATT TACTTGGTAG ATACTCGCAG AAAAGCTGAA
CTGCTATCAG AACTCATCGG CCGTAATAAT TGGCAGCAAG TGTTGGTATT TGTTAGTACC
CGAGAGAGTG CTGAGCATCT GCATGCAGAG CTAAAACTCG ATGGTGTGAA AAACGCCGTT
TTCCATGGCG AGAAAACTCA AGGCGCGAGA AACCGTGCAT TAGAGGAGTT CAAATCTGGT
AAGCTTCGTG TCATGGTGGC AACCGATGTT GCTGCTCGTG GCCTAGATAT TGAAGCCCTG
CCTTTGGTGA TTAACCTTGA ATTACCATTT GCCGCCGAGG ACTATGTTCA CCGTGTTGGT
CGAACTGGCC GTGCGGGTCT TGCTGGTCGT GCAATTTCAT TTGTGTCACC ACAAGACCGT
GAGATGATGC AAGAAATTGA AGTGCTGATA GCGCAGACTC TGCCACGGAT TACTATGCCT
GGCTATGAAG AGGGCGCGCC TCTACCGGCT CGTTATCGTG ATGTGGTGGT AAAGCCTGTA
AAAGAGAAAG GCCACAACAA ACGTAAGTAT GAAGATAAAA ACCGCCCAGC TAAAAATGCG
GTAGGAAAGA GTAATTATCG CAGCGCAGCA TCGGGAAAAA GTAGCTACGG TCGCTCGAAA
GACAAAGCTA AGAAATAG
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| Protein sequence | MNFDAFDLHP KILDAVSARG YQQLTQVQSQ VLPVAMEGKD IMACAQTGTG KTAAFALPLL
NTLIKEYSLF TDSEAELTHQ SSVKVLVLTP TRELAIQVAD NITAYAQFLP FKTTAVYGGS
NMNPQRKALQ AGVDILVATP GRLFDHIGQF GLDLSNVTHL VVDEADRMLD LGFVRDIEKV
KKLVAPAHQT LFFSATYSDA VKTLAEKMLI APEWINVATS ATASLITQEI YLVDTRRKAE
LLSELIGRNN WQQVLVFVST RESAEHLHAE LKLDGVKNAV FHGEKTQGAR NRALEEFKSG
KLRVMVATDV AARGLDIEAL PLVINLELPF AAEDYVHRVG RTGRAGLAGR AISFVSPQDR
EMMQEIEVLI AQTLPRITMP GYEEGAPLPA RYRDVVVKPV KEKGHNKRKY EDKNRPAKNA
VGKSNYRSAA SGKSSYGRSK DKAKK
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