| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3003 |
|---|
| Symbol | |
|---|
| ID | 5663393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3679577 |
|---|
| End bp | 3680995 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641237642 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001502855 |
|---|
| Protein GI | 157962821 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.697597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC TAAAAACTGC CGCTGCGGCT GCTATCTCTG TTGCGTTATT AGCGGGTTGT
AACGATGAAA CCAATAACTA CCACCCAACT GAGCCAACAC CAGATCCTAT TGAACCAATA
GAAAGAGACG GCCGCTTTGC CGCATATAAC TTATCATTCG ATCGTACTAG CTTTGAGCAG
CTTGTTAGTG AGATGACACT AACGGCTGAA AAGCAAGACG AATTAATGGA TAAGTGGTTC
GCAGGTACCT TAACTGACGA AGAGAAAGCC GTTGCAGAGA AAGTAATTCA AATCCGTAAC
GTTGCAGCAG TGATTCAAAC AGAGCGCCCA GCGGTATTGA TGATGGGAGA ATTTAACAAC
GATGGTACTG GTGAAAACCA AGATGCCATG GTTGGCTTCC GCCTTAACTA CTTGTCTGTA
CCTCAAAATG GCCTTGGCGC GACATCAGAT GACAAGAAGA TGCTTGAGCC AATTCAATTT
GGTTACTCAG AAACATTCGC CACTAACACT GGTTTACTTA GCGATTTTGA CTTAGATCGT
GACGGCAAGA TTGCCTTACC TGGTGATGCT TGGGGCTTTG GTTTCTATCA CGGTCAATAC
GCATTTGGCC TGCTCTCTAT GTATCCAATC GACACTGCCA ATATCCGTAC TTTCCAAAAC
TTCAAATGGA AAGATATGCC GGGCGAAACC AATCCAACTA TCGTTAATTG CGATGATGAG
AACAATCCGA TTCCAGCAGG CATGAAGTGT GGCGATGAAT GGTACTCTGC AGAAGCTTGG
GCTGAAAAAC CACTTTCTTC AAAGAACCAT GTTGATGTGC CAGTATTAAT CCCTACATCA
GACGGCGGCA CTCAAACTGT TCACCTGTTA ATGTCACACC CAACACCACC GGTATTCGAT
ACAGTAACTA AAAACAATGT ACTTCTAAAC AGTGCAGAAG TAGCATTCTG GAATGACTAT
GTATCTGGTT CTGATTACAT GTATGACGAC AAAGGTCTAC AAGGCGGTTT AGCTGACGAC
GCATCATTTA TGATCATGGG CGACCTTAAC GCTGATCCTA ACGATGGCGA CGGTAAAGTT
GAAACGATTG CTAAGCTACT AGCCAATGAC AATATCAATA CTCACGCAAC ATTGGGGGTT
TACGCACCTA GCAGCTTAGG TGCCGATGAG TGCTTTACTA ATGACGAATG TGGTGACTGG
GGAGCAGGTA GCCCACAATA CGTAACAAGT ACATTTGGAC TACGTGTTGA CTATGTGATG
CCATCAAGCG ACCTAAACAT CACTGACTCA GGTGTATTCT GGCCAGCCAC CTTCGAAGAA
GGTCGTCTAC TAATGAATGA TGAGCGTGTA GGTAAATATG GTGACGGCAA AGATATTTCA
TCTGATCACC GCCTTGTTTG GGTTAAAGCT GAGTTCTAA
|
|---|
| Protein sequence | MKFLKTAAAA AISVALLAGC NDETNNYHPT EPTPDPIEPI ERDGRFAAYN LSFDRTSFEQ
LVSEMTLTAE KQDELMDKWF AGTLTDEEKA VAEKVIQIRN VAAVIQTERP AVLMMGEFNN
DGTGENQDAM VGFRLNYLSV PQNGLGATSD DKKMLEPIQF GYSETFATNT GLLSDFDLDR
DGKIALPGDA WGFGFYHGQY AFGLLSMYPI DTANIRTFQN FKWKDMPGET NPTIVNCDDE
NNPIPAGMKC GDEWYSAEAW AEKPLSSKNH VDVPVLIPTS DGGTQTVHLL MSHPTPPVFD
TVTKNNVLLN SAEVAFWNDY VSGSDYMYDD KGLQGGLADD ASFMIMGDLN ADPNDGDGKV
ETIAKLLAND NINTHATLGV YAPSSLGADE CFTNDECGDW GAGSPQYVTS TFGLRVDYVM
PSSDLNITDS GVFWPATFEE GRLLMNDERV GKYGDGKDIS SDHRLVWVKA EF
|
|---|
| |