| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2999 |
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| Symbol | |
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| ID | 5663389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3674780 |
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| End bp | 3675970 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237638 |
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| Product | TonB family protein |
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| Protein accession | YP_001502851 |
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| Protein GI | 157962817 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACTTC CACCTAATTT AGGAAAAACA GCAAGTCTAG ATAGCAGTTT GCCTTCACGA
AAAAGTATAA CTAACCGAAA CTTGTTTTAT GCCGCCATAT TGGCAAGCGC TCTAGCGCTA
TCTCCTCAAG CTGTAGCCTC TGAATTTGGT GACGCGTATT CCGCTTATAA AGCCGCTGTG
ACCGCCAAGG ATGAAGCGAA AATAGAGCTT TATGCGCTTA AGGCTTACGA GTTTGGTACA
GTGAAGTTTG GCCCTGATAG CCTAGATACG GCTATATTGG CACTAAATGC GGGCAATGCC
TTGATTGTCA ATGTACCTAA GAATACCTTC GAGGAAGAAA ACGCAGCTAA GACTAATAAG
CTAAAGCTAC AGGCGTTCGA GCTGTATCAG GTAGCGCTAG TGACATACCG TAAAACCTAC
GGCGATAAGG CGAAAGAACT GATCGATCCG CTCCTAGGGT TAAGTGATGC CAGCACAGAT
AAAGAGGCTC GAAGCTATTT AGATGAGGCA CTGGAAATTG CCGATTATGC AAACAATGCA
ATGTTGCTTG CCGACACAAA GATGGCTTAC TTTGAGCGCT TAGTTAATAC CCCTTATTAC
AGACCTAAGG TACGCGATTA CGCTTTCGAT GCTCAACGAA CCTATGCAGA TTTATTACCT
GAAGATGCAA TGAAGCGCGT ACTAACGAGT TTCACCTTGG GTAATGTTCG CCTTGCAGAA
AAAGATTATG ATGAGGCAGA GGAGCTATTT TTAGCGGTTA TTAAACAGTT TGAAATGCTC
GATTATAGTC ACCCTTATGA GCTTGCTGCA CATGCTAGAT TAGTTCAACT CTATGAGCTT
GATGGGGAGA GTGATAAGTC GACAAAGCAT TGCATCGCTA TCGGCAACAT GACGCCCTGG
AACGATAATA TCGAGCCTAC TCCATTGTTT CGTAAGGAAC CTAAATATCC ATTGGCTTAT
GCCAAAGCGG GTAAAACAGG GAGTACTACG ATGAGTTTCA CCATAGATAA AATGGGTTTT
GTTAAAGACC CTATGGTTAC CGATACACAA GGTGGCAGCA AGTTTAAGAA AGAATCATTA
AAGGCACTTA AAAAGTGGCG TTATGCACCA AAATTTATAG ATGGTAAGGC TGTTGAAGTA
CAAGGAATGA GTGTAAAGCT AGATTATTGG CTTGAGACGA CGCGACGTTA A
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| Protein sequence | MLLPPNLGKT ASLDSSLPSR KSITNRNLFY AAILASALAL SPQAVASEFG DAYSAYKAAV
TAKDEAKIEL YALKAYEFGT VKFGPDSLDT AILALNAGNA LIVNVPKNTF EEENAAKTNK
LKLQAFELYQ VALVTYRKTY GDKAKELIDP LLGLSDASTD KEARSYLDEA LEIADYANNA
MLLADTKMAY FERLVNTPYY RPKVRDYAFD AQRTYADLLP EDAMKRVLTS FTLGNVRLAE
KDYDEAEELF LAVIKQFEML DYSHPYELAA HARLVQLYEL DGESDKSTKH CIAIGNMTPW
NDNIEPTPLF RKEPKYPLAY AKAGKTGSTT MSFTIDKMGF VKDPMVTDTQ GGSKFKKESL
KALKKWRYAP KFIDGKAVEV QGMSVKLDYW LETTRR
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