| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2995 |
|---|
| Symbol | |
|---|
| ID | 5663385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3668740 |
|---|
| End bp | 3671559 |
|---|
| Gene Length | 2820 bp |
|---|
| Protein Length | 939 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641237634 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001502847 |
|---|
| Protein GI | 157962813 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTA ATTATGAAGC TGTATTAAGA GATTTACGCA GACAGGTGGG CGAACACGCC
GCCACTAACG ATCCGGTACG CCGTTTTGCC TGGTCAACCG ACGCCAGTTA TTTTCGCATC
GTGCCCGAGA TAGTCGTTCA CGCCGACACC TTAGAGCAAG CCAAACGCAC ACTCGCGATT
GCTCGCACCT ATGGCGCGCC AGTCACCTTT CGCGCCGCTG GTACCAGCCT TTCAGGCCAA
GCCATTGGTG AAGGCATATT ACTCATTCTC GGTCACGATG GCTTTAGAAC TTTAACGGTC
AGTGACGATG CCTCGAAAAT TACCTTAGGT ACCGCTGTTA TTGGCGCCGA TGCTAACGCA
GTACTCAAGC CGTTAAATAA AAAGATTGGT CCCGATCCTG CCACCATAGC ATCGGCAAAA
ATAGGTGGAA TCGTCTCGAA CAACGCTTCG GGCATGTGTT GCGGCACGGC GCAAAACAGT
TATCAAACGA TTGCCTCTGC CAAACTACTG TTTGCCGATG GCACTGAGCT AGACACCGGC
TGTGAATCGT CAAAAGAAGC CTTTAGTCAG TCGCATCCAC AGTTACTCAA AGAGCTTACT
GAACTTGCCG AGCTAACCGT TAACAACGCC ACGCTTGCTG CACGAATTCG TAAGAAGTTC
TCCATTAAAA ACACCACAGG TTACAGCCTC AATGCACTGG TAGACTTTAC AGATCCATTC
GAGCTGATCA ACCACCTGAT TGTCGGCGCC GAAGGCACGC TCGCCTTTGT TGAAGAGGTC
ACTTACTACA CGGTTGATGA GGCGCGCTTT AAAGCCTCTG CCATGGCAGT TTTTTTCAAT
ATGGAAGATG CCGCTCGCGC TGTTCCGCCA CTTGTTGGTG ATAGCGTCGC CGCAGCCGAG
TTGCTCGACT GGGCATCAAT TAAAGCGGTA ACGGGTAAGG CTGGCATGCC AGAATGGTTA
GCGCAATTAC CTGAAGGCGC CGCAATCTTA TTGATTGAGT CACGTGCGAA CGATAAAGAG
ACCTTAGAGA TTTATACTCA GCATGTTATC GCTAAACTTG CCCATATTGA AACAGAGCGT
CCAATTAGCT TCAGTGACGA TCCAGCCGTA TTTGGTCAGT ACTGGGCGAT GCGTTCAGGG
CTGTTCCCCA TTATTGGCGG CGAACGCCCT AAGGGCACCT CTGTTATCAT CGAAGATGTG
GCTTTCGAGC TAGAACACTT GGCTGCTGCG GCTAATGATT TAACCGAGTT ATTCCATAAG
CATAATTACC CTGAAGGGGT GATTTATGGT CACGCACTCG CGGGTAACTT CCACTTTATC
ATCACTCCCA CCTTCAACAC TCAGGCTGAC ATCGAGCGTT TCCACGCCTT TATGCAAGAT
GTTGCCGAGA TGGTGATCAA TAAATACGAT GGCTCGATGA AGGCTGAGCA CGGCACCGGC
CGCGCCGTCG CACCTTTCGT TGAGATGGAA TGGGGCAGCG ATGCTTATAC CTTGATGAAA
CGTATCAAGC AGATCTTTGA CCCTGAAGGG TTATTGAACC CTGGAGTTAT TCTTAACGAT
GATAATCAAA TACACGTTAA AAACATCAAG CCCTGCCCCG TGGTCGATGA CTTAGTCGAC
AAGTGTATCG AATGCGGTTT CTGCGAAAAA ACCTGCCCAA CCTCAGCCTT AAATATGTCA
CCGCGTCAAC GTATCGCAAC CCTGCGTGAA ATTGAGCGCC TAGAGCAGTC CGGCGACAAG
CAAGCCGCAG AACAGATGCG CGCCGCAGCC AAGTATGATG TCGTCGATAC CTGCGCCGCC
TGTCAGCTTT GTACCATTGC CTGCCCAGTT GATAACAGCA TGGGCGAGCT GGTACGTAAA
CTGAGAACGC CGTATATCAC CAGCACTGAG CAAAAGGTAC TCGACTTCCA AGCTAAGCAC
TTTGGCGCGG TAAATCAGGT GATCAGCACA GGTTTTGATG TACTGGGTAC CATTCATAAA
ATCACCGGTA GCGCGATAAC TGGCGCAATA ATGAAAGCGG GACGCGTAGT CACTAAAGAA
GTGCCTTATT GGAACCCAGA TTTCCCCAAA GGTGGCAAGC TACCTAAGCT AAGCGCGCCG
CTTCCGGGTC AAGAAACTGT GGTTTATTTC CCTGCGTGCG GTGGCCGCAC CTTTGGACCA
ACGCCAAAAG ATCCCGATAA CCGCTCCCTA CCGGAAGTGG TCGTCACGTT ACTCGAACGC
TCTGGTTATA ACGTCATCAC TCCAGAGAAG ACTCGCGAGC TATGTTGCGG TCAGATGTGG
GAGTCTAAAG GAGACTTCAA AAATGCCGAC GCTAAGCGCA AAGAACTGAT TGAAGCCGTT
TCGACCATGA CTCAAGTCGG CAAACTACCG GTTATCATCG ATGCGCTTTC ATGTACTTAC
CGTACTCTTA CCGGCGACAA GTCACTGACC GACAAAATCG AGATTGTCGA TATGGTTGAT
TTTATCCATG ACAAGCTACT CGATAAACTG ACCATTACCA GCAAGAAACC AGCCGTCGCG
CTGCACTTGG GCTGTAGTGC ACGCAAGATG AAACTTGAAC CTAAAATGGA AGCCATCGTC
GATGCCTGCA GTAAACAAGT TGTTCGCCCG GCAGGAATAG ATTGTTGCGG CTATGCCGGT
GAAAAAGGGC TTTATAAGCC AGAGATAAAT GCCAGCGCAC TGCGTAACAT CAAGAAGCTT
ATCCCGGTTG ATGTGAGCGA AGGCTATTAC GCTAACCGCA TGTGTGAAGT AGGTTTAACT
CAACATAGTG GCATCTCTTA TCGCCACCTT GCCTACCTAT TAGAGGAGTG TACTCGCTAG
|
|---|
| Protein sequence | MSINYEAVLR DLRRQVGEHA ATNDPVRRFA WSTDASYFRI VPEIVVHADT LEQAKRTLAI
ARTYGAPVTF RAAGTSLSGQ AIGEGILLIL GHDGFRTLTV SDDASKITLG TAVIGADANA
VLKPLNKKIG PDPATIASAK IGGIVSNNAS GMCCGTAQNS YQTIASAKLL FADGTELDTG
CESSKEAFSQ SHPQLLKELT ELAELTVNNA TLAARIRKKF SIKNTTGYSL NALVDFTDPF
ELINHLIVGA EGTLAFVEEV TYYTVDEARF KASAMAVFFN MEDAARAVPP LVGDSVAAAE
LLDWASIKAV TGKAGMPEWL AQLPEGAAIL LIESRANDKE TLEIYTQHVI AKLAHIETER
PISFSDDPAV FGQYWAMRSG LFPIIGGERP KGTSVIIEDV AFELEHLAAA ANDLTELFHK
HNYPEGVIYG HALAGNFHFI ITPTFNTQAD IERFHAFMQD VAEMVINKYD GSMKAEHGTG
RAVAPFVEME WGSDAYTLMK RIKQIFDPEG LLNPGVILND DNQIHVKNIK PCPVVDDLVD
KCIECGFCEK TCPTSALNMS PRQRIATLRE IERLEQSGDK QAAEQMRAAA KYDVVDTCAA
CQLCTIACPV DNSMGELVRK LRTPYITSTE QKVLDFQAKH FGAVNQVIST GFDVLGTIHK
ITGSAITGAI MKAGRVVTKE VPYWNPDFPK GGKLPKLSAP LPGQETVVYF PACGGRTFGP
TPKDPDNRSL PEVVVTLLER SGYNVITPEK TRELCCGQMW ESKGDFKNAD AKRKELIEAV
STMTQVGKLP VIIDALSCTY RTLTGDKSLT DKIEIVDMVD FIHDKLLDKL TITSKKPAVA
LHLGCSARKM KLEPKMEAIV DACSKQVVRP AGIDCCGYAG EKGLYKPEIN ASALRNIKKL
IPVDVSEGYY ANRMCEVGLT QHSGISYRHL AYLLEECTR
|
|---|
| |