| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2981 |
|---|
| Symbol | |
|---|
| ID | 5663371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3653750 |
|---|
| End bp | 3654832 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641237620 |
|---|
| Product | putative RNA 2'-O-ribose methyltransferase |
|---|
| Protein accession | YP_001502833 |
|---|
| Protein GI | 157962799 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAACC TATTTTTATT TTGCCGTGCT GGCTATGAGA AAGATTGCGC AGCAGAGATC
CAAGTGCGCG CAGCTGAGCT CGATATTGGT GGATTTGTAA AAACCAATAC TAATGATGCT
TATGTGATTT TTCAGTGCTT CCAAGCCGGT GATGCTGAAG TTTTAGCTAA AAATATCAGT
CTAGACTCGC TTATTTTTGC CAGACAGATG TTTGCAGCAA AAGAGTTGCT AAAAGGTTTA
CCTGAGCAAG ATAGAATTAG TCCGATTGTT GAAGCCTTAA CTCAGGTGAA CAAAGCGGGT
GAACTGCGCG TTGAGACGCC AGATACCAAC GAAGCGAAAG AACGTTCAAA CTTCTGCCGT
AAGTTTACTG TACCGCTTAG ACAAGCGTTA AAGAAATCTG GCGCCTTGCT TGAGAAAGAA
AACCCTAAGC GACCTATTAT TCATGTGTGT TTTGTTGCCT CTGGCCAAGC ATATGTCGGT
TACTCTTTAA GTAACAATAG CTCACCTTAT TTCATGGGGA TCCCAAGACT TAAGATTGCT
GCTGATGCAC CGAGTCGCTC TACTCTTAAG TTAGATGAAG CTTTTATTCA CTTCATTCCT
AAAGAAGAGC AAGAAACGCG TCTAAGCAGT GGTATGAAGG CTGTGGATCT TGGTGCTTGT
CCTGGTGGTT GGACTTATCA ACTTGTGAGA CGCGGTATGT TTGTTGCGGC TGTCGATAAC
GGCCCGATGG ATCAAGGCTT GATGGATACC GGGCAGGTAA AACATTACCA AGCTGACGGA
TTTAGATTCG AGCCACCAAG AAAGAACATC ACTTGGTTAG TTTGCGACAT GATTGAAAAG
CCATCTCGCG TGGCAGAGCT GATCGAAGCC TGGGCAATCA ATGGCTGGTT TAAAGAGTCA
ATCTTCAACT TAAAACTGCC TATGAAGGCG CGTTATAAAG AAGTGTCGAC CATTCTAGCT
ACGATGGAAG AGATTTTAAA AGAGAACGGT GTAGATGACT TCTCTATCGC GGCGAAACAT
TTATATCACG ACCGTGACGA AGTGACCGTT CACCTCTGCT TGCGACCAAG TCAACCTTGG
TAA
|
|---|
| Protein sequence | MINLFLFCRA GYEKDCAAEI QVRAAELDIG GFVKTNTNDA YVIFQCFQAG DAEVLAKNIS
LDSLIFARQM FAAKELLKGL PEQDRISPIV EALTQVNKAG ELRVETPDTN EAKERSNFCR
KFTVPLRQAL KKSGALLEKE NPKRPIIHVC FVASGQAYVG YSLSNNSSPY FMGIPRLKIA
ADAPSRSTLK LDEAFIHFIP KEEQETRLSS GMKAVDLGAC PGGWTYQLVR RGMFVAAVDN
GPMDQGLMDT GQVKHYQADG FRFEPPRKNI TWLVCDMIEK PSRVAELIEA WAINGWFKES
IFNLKLPMKA RYKEVSTILA TMEEILKENG VDDFSIAAKH LYHDRDEVTV HLCLRPSQPW
|
|---|
| |