| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2974 |
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| Symbol | |
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| ID | 5663364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3643872 |
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| End bp | 3645428 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641237613 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001502826 |
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| Protein GI | 157962792 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0516794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATG TCGCCATAAG TACGTCTCAA ATAAGCTTGT TACAGCAAAA ACTCTTTGCT
GCTAGACAGG CATTAGAAGA GATGACCGAA GAGCAAAATG AAAAGCTACA CATCCTCATA
CAGTTTATTG GACAACTAAG CCTCGCCTGT AAAGGTCAAA ATCTAGAGCT TGATAATAAG
CTCGCTAAAT TGCGTCATAA ATTAGTAAAG TTTAACCAAT TCGAAGATTC ACTTCCCGCT
CTTAATGAAG CCGATACCAT CCTTAAGCAG CAATATGCCC GTGTGATGCT GCAGCTCGAA
GATAGCCGCC AATCATTAGC GAATATGGTG AGTCAAATTC AGCGTATCGA CTCGCTTCCA
AGTAAGTTAA AGCTAGAAAT TACTTACTTT AAAAAAGAGC TAATTAAGCC GTTTCACACC
CACTGGGATT ACATTCCAAA GGTGGAGAAG GTGGTTAATT TTTATGATGA GATCTTAAAA
GAAAAACTTA ACCTTGGTGA ACAGTTCGAG ATCTTACCTC GTCATCGACA AGCCGCTCAT
GAGCTTGCAC TGCTGTTATC AGAAATAGAG TTTAGAAAAG AGCAACGACA ACAGATCTCA
GAAATGAAGA AGTCGTTAAC CGAAGAGTTT GAACTCGACA CCTTGCTTGA AGCTTATCAG
GTGGTACTTA ATCTACTACT GGATAACATT GCTAGAGAAA AAACCGCCTC GCAAGAGTTT
CTATACGTAC TCAATAATGC ACTGAGCAAT GTTCAAGAGG TAGTCACAGA TAGCTACAGT
CACTCGGTAA AGAATTTTCA AGTGACCAAG CAGCTTAATC GCGATATCAA TTTCCAAGTT
GATAACGTTG GCGAAGCCGT GATTGAAGTC GATGATATTG ATGAGTTAAA AAACCAAATA
GCCCTTCATT TATCCTCTTT GCGAAAATCT CTTGGGCGTA AAGAACTGCT CGAAAATAGA
GAGCAAACCC AGCTAAAGCA ATCTGTTGAG GCCTTACGTC AAGAACTCAA AGCCCTTGGA
AAAGAAACTG ACTCATACAA AGAGCGCTTA TTTGAGCAGC AAAAGCTTAA TCTATTAGAC
TCATTAACCC AGCTACCTAA TCGCAGCGCA TTAGAAGAGC GCATGGATAT TGAATATCGC
AACTATAAGC GAACCAAACA GCCATTATGG GTCGCAGTCG CCGATATCGA TCACTTCAAA
ACAATTAATG ACAGTTTCGG CCATAGTACT GGGGATAAAA CACTGCAAGT AATTGCTATG
GCGCTGAAAA ATGCCTTAAG AGAGTCGGAG TTTGTCGCAC GTTATGGCGG TGAAGAGTTT
GTACTCTTGC TGCCTAATGT TGCCGAGAGT GACATCCAAC CTTTACTTAA CCGTGTGAGA
GAAAAAGTAA AAAGCATACC GTTTAAGTTT AAAAATCAGC GAATTACAGT TACAGTATCT
ATAGGTGCTG CGCAAATAAT CGAAAATGAG CTCATCACAG AAACATTCGA CCGAGCCGAC
GCTGCGCTTT ATAAAGCCAA AAATGAAAGC AGAGATAGGG TCATCATTGA CTTCTAA
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| Protein sequence | MKDVAISTSQ ISLLQQKLFA ARQALEEMTE EQNEKLHILI QFIGQLSLAC KGQNLELDNK
LAKLRHKLVK FNQFEDSLPA LNEADTILKQ QYARVMLQLE DSRQSLANMV SQIQRIDSLP
SKLKLEITYF KKELIKPFHT HWDYIPKVEK VVNFYDEILK EKLNLGEQFE ILPRHRQAAH
ELALLLSEIE FRKEQRQQIS EMKKSLTEEF ELDTLLEAYQ VVLNLLLDNI AREKTASQEF
LYVLNNALSN VQEVVTDSYS HSVKNFQVTK QLNRDINFQV DNVGEAVIEV DDIDELKNQI
ALHLSSLRKS LGRKELLENR EQTQLKQSVE ALRQELKALG KETDSYKERL FEQQKLNLLD
SLTQLPNRSA LEERMDIEYR NYKRTKQPLW VAVADIDHFK TINDSFGHST GDKTLQVIAM
ALKNALRESE FVARYGGEEF VLLLPNVAES DIQPLLNRVR EKVKSIPFKF KNQRITVTVS
IGAAQIIENE LITETFDRAD AALYKAKNES RDRVIIDF
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